RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NAT1P18440 290 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 IL32P24001 234 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 AVPR2P30518 371 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 CASRP41180 1078 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 PNLIPRP2P54317 469 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 MC2RQ01718 297 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 PCK2Q16822 640 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 MS4A18Q3C1V0 323 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 RAB12Q6IQ22 244 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF813Q6ZN06 617 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 RHOUQ7L0Q8 258 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 ASB10Q8WXI3 467 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 FOXRED1Q96CU9 486 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 NPAS1Q99742 590 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 CYB5R1Q9UHQ9 305 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 FAM25EA8MYX2 175 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 ADAM10O14672 748 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 BDKRB2P30411 391 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 SNTB1Q13884 538 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF169Q14929 603 aaPredicted RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 PRSS58Q8IYP2 241 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 TMEM105Q8N8V8 129 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 CHST4Q8NCG5 386 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 TMEM185AQ8NFB2 350 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 OR52N4Q8NGI2 321 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 FAM46BQ96A09 425 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 GAREM1Q9H706 876 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 FER1L5A0AVI2 2057 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 TNRC6BQ9UPQ9 1833 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 MPTX1A8MV57 137 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 EIF1AYO14602 144 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 STK17BO94768 372 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 HOXA6P31267 233 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 AFF3P51826 1226 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 IL13RA1P78552 427 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 QRFPP83859 136 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 DEFB133Q30KQ1 61 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 PAN3Q58A45 887 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 RTN4RL2Q86UN3 420 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 ADAD2Q8NCV1 583 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 FAM117AQ9C073 453 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 CENPMQ9NSP4 180 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 EXPH5Q8NEV8 1989 aa16.34■□□□□ 0.21
PCDHA1-202ENST00000394633 OR2AT4A6NND4 320 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 LAMTOR5O43504 91 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 OR2T1O43869 369 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 H2BFMP0C1H6 154 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 DHPSP49366 369 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 PRKXP51817 358 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 NSDHLQ15738 373 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 SLC29A4Q7RTT9 530 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 BOLLQ8N9W6 283 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 CLRN3Q8NCR9 226 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 PHB2Q99623 299 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 CHRNA10Q9GZZ6 450 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 MBD2Q9UBB5 411 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 A6NIZ1 184 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 HSD11B1P28845 292 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 HRH1P35367 487 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 RAP1BP61224 184 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 RAP1AP62834 184 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 C1orf210Q8IVY1 113 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 ZNF441Q8N8Z8 693 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 ZNF248Q8NDW4 579 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 OR1N1Q8NGS0 311 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 CASTOR1Q8WTX7 329 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 DAZLQ92904 295 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 ADAT3Q96EY9 351 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 KCNK17Q96T54 332 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 NKX6-2Q9C056 277 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 FN3KRPQ9HA64 309 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 FAM206AQ9NX38 181 aa16.33■□□□□ 0.2
PCDHA1-202ENST00000394633 CCDC163A0A0D9SF12 145 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 NPIPA5E9PKD4 350 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 EFSO43281 561 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 KCNAB3O43448 404 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 TTRP02766 147 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 ERCC1P07992 297 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 VSIG8P0DPA2 414 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 GNB3P16520 340 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 INPP5JQ15735 1006 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 PMS2CLQ68D20 193 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 DNM1P34Q6PK57 102 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 DEGS2Q6QHC5 323 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 OR1S2Q8NGQ3 325 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 THAP6Q8TBB0 222 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 ZNF416Q9BWM5 594 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 PTGES2Q9H7Z7 377 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 FSCN3Q9NQT6 498 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 COPS7AQ9UBW8 275 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 NPIPA1Q9UND3 350 aa16.32■□□□□ 0.2
PCDHA1-202ENST00000394633 F5H0A9 414 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 GNALP38405 381 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 MMP16P51512 607 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 ZP4Q12836 540 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 PDSS1Q5T2R2 415 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 KCTD9Q7L273 389 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms