RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 SEH1LQ96EE3 360 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 SLC41A2Q96JW4 573 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 LURAP1Q96LR2 239 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 TRIM2Q9C040 744 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 LAT2Q9GZY6 243 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 SLCO5A1Q9H2Y9 848 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 CHMP1AQ9HD42 196 aaPredicted RBP9.98□□□□□ -0.81
CUX1-204ENST00000393824 FAM96BQ9Y3D0 163 aa9.98□□□□□ -0.81
CUX1-204ENST00000393824 FER1L5A0AVI2 2057 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 TRAV8-7A0A075B6U6 113 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 A0A0A6YYC8 382 aaPredicted RBP9.97□□□□□ -0.81
CUX1-204ENST00000393824 TMEM150CB9EJG8 249 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 I3L1I5 382 aaPredicted RBP9.97□□□□□ -0.81
CUX1-204ENST00000393824 AP4M1O00189 453 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 UPK3AO75631 287 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 NDUFB2O95178 105 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 LY86O95711 162 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 AMY2AP04746 511 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 TACSTD2P09758 323 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 TLX1P31314 330 aaPredicted RBP9.97□□□□□ -0.81
CUX1-204ENST00000393824 HSD11B2P80365 405 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 OR7A5Q15622 319 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 FHL5Q5TD97 284 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 OR10K2Q6IF99 312 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 LYG2Q86SG7 212 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 SLC25A42Q86VD7 318 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 OR13C8Q8NGS7 320 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 AKR7LQ8NHP1 331 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 FOXRED1Q96CU9 486 aaPredicted RBP9.97□□□□□ -0.81
CUX1-204ENST00000393824 CCDC74BQ96LY2 380 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 GGACTQ9BVM4 153 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 SELENOIQ9C0D9 397 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 PDE7BQ9NP56 450 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 SEMA5BQ9P283 1151 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
CUX1-204ENST00000393824 AHCTF1Q8WYP5 2266 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 ADAMTS20P59510 1910 aa9.97□□□□□ -0.81
CUX1-204ENST00000393824 A0A087WV48 116 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 PRR32B1ATL7 298 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 NTN3O00634 580 aaPredicted RBP9.96□□□□□ -0.81
CUX1-204ENST00000393824 CDC40O60508 579 aaKnown RBP eCLIP9.96□□□□□ -0.81
CUX1-204ENST00000393824 ZNF432O94892 652 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 MAS1P04201 325 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 COX5BP10606 129 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 ZNF14P17017 642 aaPredicted RBP9.96□□□□□ -0.81
CUX1-204ENST00000393824 CPT2P23786 658 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 PSMB6P28072 239 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 SLC6A9P48067 706 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 SOX2P48431 317 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 CASP6P55212 293 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 ELAVL1Q15717 326 aaKnown RBP9.96□□□□□ -0.81
CUX1-204ENST00000393824 ANGPTL5Q86XS5 388 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 ZNF595Q8IYB9 648 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 D2HGDHQ8N465 521 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 SLC38A9Q8NBW4 561 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 NPEPL1Q8NDH3 523 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.96□□□□□ -0.81
CUX1-204ENST00000393824 FBXO17Q96EF6 278 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 MALSU1Q96EH3 234 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 Q96M85 177 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 SERINC2Q96SA4 455 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 NEU1Q99519 415 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 SSX3Q99909 188 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 NMNAT2Q9BZQ4 307 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 OPA3Q9H6K4 179 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 FRRS1LQ9P0K9 344 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.81
CUX1-204ENST00000393824 FAM157AC9JC47 383 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 EIF1AYO14602 144 aaKnown RBP9.96□□□□□ -0.82
CUX1-204ENST00000393824 ARPC3O15145 178 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 CRHP06850 196 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 FCGR3AP08637 254 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 RD3LP0DJH9 198 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 CPMP14384 443 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 VAMP1P23763 118 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 EIF1AXP47813 144 aaKnown RBP9.96□□□□□ -0.82
CUX1-204ENST00000393824 RAB2AP61019 212 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 OR52W1Q6IF63 320 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 DPY19L2P2Q6ZN68 376 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 SLC29A4Q7RTT9 530 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 OR4N5Q8IXE1 308 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 RNASE11Q8TAA1 199 aaKnown RBP9.96□□□□□ -0.82
CUX1-204ENST00000393824 DOK4Q8TEW6 326 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 NAT6Q93015 286 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 CPNE2Q96FN4 548 aaPredicted RBP9.96□□□□□ -0.82
CUX1-204ENST00000393824 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 OCIAD1Q9NX40 245 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 SLC2A8Q9NY64 477 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 KCNE5Q9UJ90 142 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 WIF1Q9Y5W5 379 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 POMT1Q9Y6A1 747 aa9.96□□□□□ -0.82
CUX1-204ENST00000393824 AKAP13Q12802 2813 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 C9orf170A2RU37 121 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 PSMD9O00233 223 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 BRINP1O60477 761 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 NQO2P16083 231 aa9.95□□□□□ -0.82
CUX1-204ENST00000393824 ACKR3P25106 362 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms