RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 C21orf58P58505 322 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 OR2B8PP59922 312 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SMAD2Q15796 467 aaKnown RBP13.48□□□□□ -0.25
CCDC50-201ENST00000392455 RPEL1Q2QD12 228 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 FBXL17Q9UF56 701 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TCRBV3S1A0A5B6 114 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
CCDC50-201ENST00000392455 DOK2O60496 412 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 EDN3P14138 238 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 OR4A4PQ8NGN8 299 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 CD37P11049 281 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 CBLL1Q75N03 491 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SCN5AQ14524 2016 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 FOXA1P55317 472 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 PNRC1Q12796 327 aaPredicted RBP13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SPANXN5Q5MJ07 72 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 MDGA1Q8NFP4 955 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 PERPQ96FX8 193 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 WWTR1Q9GZV5 400 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
CCDC50-201ENST00000392455 C9orf135Q5VTT2 229 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 CORO6Q6QEF8 472 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 NRARPQ7Z6K4 114 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF391Q9UJN7 358 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 RPS16P62249 146 aaKnown RBP13.47□□□□□ -0.25
CCDC50-201ENST00000392455 IHHQ14623 411 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 ANAPC16Q96DE5 110 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 ASIC5Q9NY37 505 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 GPR37O15354 613 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 RPL12P30050 165 aaKnown RBP13.47□□□□□ -0.25
CCDC50-201ENST00000392455 AQP6Q13520 282 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
CCDC50-201ENST00000392455 DTD2Q96FN9 168 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 EDN1P05305 212 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 PGA3P0DJD8 388 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 IRS1P35568 1242 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 PRDX4Q13162 271 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 TOMM20LQ6UXN7 152 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 CYHR1Q6ZMK1 362 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 LRP11Q86VZ4 500 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 SEC22AQ96IW7 307 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 LRP6O75581 1613 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 A0A1W2PPQ1 181 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 CYB561P49447 251 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 VMA21Q3ZAQ7 101 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 LRRC10Q5BKY1 277 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 MANBALQ9NQG1 85 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 LYZL6O75951 148 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 C1orf105O95561 183 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 FGF2P09038 288 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 LMX1BO60663 402 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 ALX3O95076 343 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 HTR1DP28221 377 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 NPY4RP50391 375 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
CCDC50-201ENST00000392455 ELOA3CA0A087WX78 387 aaPredicted RBP13.46□□□□□ -0.25
CCDC50-201ENST00000392455 TRGV10A0A0A0MS01 117 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF816-ZNF321PA0A0X1KG74 233 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 NME2P1O60361 137 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 FCGR2CP31995 323 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.25
CCDC50-201ENST00000392455 HOXC5Q00444 222 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 SEMA3BQ13214 749 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 SRSF9Q13242 221 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC50-201ENST00000392455 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 NTNG2Q96CW9 530 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 A4GALTQ9NPC4 353 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 SLCO1B1Q9Y6L6 691 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 MFSD9Q8NBP5 474 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 VCX2Q9H322 139 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 OR1A1Q9P1Q5 309 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 KIAA1217Q5T5P2 1943 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 CYBAP13498 195 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 ASAH1Q13510 395 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF789Q5FWF6 425 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
CCDC50-201ENST00000392455 PARS2Q7L3T8 475 aaKnown RBP13.46□□□□□ -0.25
CCDC50-201ENST00000392455 OR4S1Q8NGB4 309 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 OR51S1Q8NGJ8 323 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 MRAP2Q96G30 205 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 P2RY12Q9H244 342 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 LRIT1Q9P2V4 623 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 SERINC4A6NH21 518 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 ACTL6AO96019 429 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 CD200P41217 278 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 GALR1P47211 349 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 ACPTQ9BZG2 426 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 PSENENQ9NZ42 101 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 C5P01031 1676 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 MPDZO75970 2070 aa13.46□□□□□ -0.25
CCDC50-201ENST00000392455 CLEC18AA5D8T8 446 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms