RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 GPR171O14626 319 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ITGB1BP1O14713 200 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 EIF1BO60739 113 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KLF8O95600 359 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KRT75O95678 551 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SNAP29O95721 258 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TGM6O95932 706 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 INSP01308 110 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 IFNA16P05015 189 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CRHP06850 196 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TFPTP0C1Z6 253 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF735P0CB33 412 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 COX5BP10606 129 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ABOP16442 354 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RAB3AP20336 220 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KITLGP21583 273 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 GALP22466 123 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CPN2P22792 545 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SERPINB1P30740 379 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 BTCP35070 178 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SERPINB5P36952 375 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 EIF1P41567 113 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ACTR1BP42025 376 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RPL5P46777 297 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RAB13P51153 203 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 PLP1P60201 277 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 NAA20P61599 178 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ERVK-25P63136 954 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CKAP4Q07065 602 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SELENBP1Q13228 472 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 STX3Q13277 289 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CUL2Q13617 745 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KIAA0087Q14695 138 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CHRNA6Q15825 494 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 HADHQ16836 314 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CHRFAM7AQ494W8 412 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 C2orf83Q53S99 150 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TNFAIP8L3Q5GJ75 292 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 AGBL2Q5U5Z8 902 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 C3orf33Q6P1S2 294 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ERICH5Q6P6B1 374 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TRIM40Q6P9F5 258 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ACP7Q6ZNF0 438 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RTL4Q6ZR62 310 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 FAM122BQ7Z309 247 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 PEX26Q7Z412 305 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TAC4Q86UU9 113 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 BBS7Q8IWZ6 715 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TBC1D19Q8N5T2 526 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 Q8N7P7 452 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SNX31Q8N9S9 440 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TTC29Q8NA56 475 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 OR4F6Q8NGB9 312 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF420Q8TAQ5 688 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RDH5Q92781 318 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CPNE4Q96A23 557 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TLCD1Q96CP7 247 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ECHDC3Q96DC8 303 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 LRRC39Q96DD0 335 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TSNARE1Q96NA8 513 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 MS4A4EQ96PG1 132 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 OR8B4Q96RC9 309 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 NRTNQ99748 197 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RASL11BQ9BPW5 248 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SELENOSQ9BQE4 189 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF251Q9BRH9 671 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TMED9Q9BVK6 235 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 MFFQ9GZY8 342 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SLC22A4Q9H015 551 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RACGAP1Q9H0H5 632 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ALX4Q9H161 411 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TRIM45Q9H8W5 580 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 EML4Q9HC35 981 aaKnown RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ADAP2Q9NPF8 381 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 EXD2Q9NVH0 621 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KLHL28Q9NXS3 571 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 COA4Q9NYJ1 87 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CALYQ9NYX4 217 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 PISDQ9UG56 409 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SLC25A15Q9Y619 301 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 SHANK3Q9BYB0 1731 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 MEGF6O75095 1541 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 CPS1P31327 1500 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TULP4Q9NRJ4 1543 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RGPD8O14715 1765 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RGPD5Q99666 1765 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ADGRB1O14514 1584 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 RAPGEF6Q8TEU7 1601 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MYO5AQ9Y4I1 1855 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SIGLEC1Q9BZZ2 1709 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SLIT1O75093 1534 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 IGKV6D-41A0A0C4DH26 115 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 WI2-2373I1.2A0A1W2PRP0 233 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 C9orf170A2RU37 121 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CTAGE15A4D2H0 777 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 LINC00862A6NCI5 91 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FAM47DPA6NHR8 397 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF729A6NN14 1252 aaPredicted RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 C2orf74A8MZ97 194 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms