RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 RPS23P62266 143 aaKnown RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 SP4Q02446 784 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 TNFRSF9Q07011 255 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 PPIDQ08752 370 aaKnown RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 PNOCQ13519 176 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 SSX2Q16385 188 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 RNASEKQ6P5S7 137 aaKnown RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 CASC1Q6TDU7 716 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 GPATCH11Q8N954 259 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZNF680Q8NEM1 530 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR9K2Q8NGE7 335 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR52E2Q8NGJ4 325 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR13C2Q8NGS9 318 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 ACMSDQ8TDX5 336 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 C18orf15Q96N68 181 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZFP3Q96NJ6 502 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR5B12Q96R08 314 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 MICU1Q9BPX6 476 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 RHOXF2Q9BQY4 288 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 LINC00574Q9H8X3 128 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 MED4Q9NPJ6 270 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 IL37Q9NZH6 218 aa0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 PSMC3IPQ9P2W1 217 aaPredicted RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 UXTQ9UBK9 157 aaPredicted RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 TRMT112Q9UI30 125 aaKnown RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZNF230Q9UIE0 474 aaPredicted RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZNF638Q14966 1978 aaKnown RBP0.86□□□□□ -2.27
RNU6-541P-201ENST00000384709 IGHV3-49A0A0A0MS15 119 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TRBV9A0A0B4J1U6 114 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TRBV11-1A0A0K0K1C0 115 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 C17orf51A8MQB3 221 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 C4orf51C9J302 202 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 K7EMT4 169 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 SIRPB1O00241 398 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 DNALI1O14645 258 aaPredicted RBP0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 RAD51CO43502 376 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 IGLV6-57P01721 117 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 EIF4EP06730 217 aaKnown RBP0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 PABPC4LP0CB38 370 aaKnown RBP0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 CR1P17927 2039 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 GGT1P19440 569 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 CHMLP26374 656 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 FUSP35637 526 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 PRPHP41219 470 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 UBE2E1P51965 193 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 MEF2CQ06413 473 aaPredicted RBP0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 PRSS54Q6PEW0 395 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ADM2Q7Z4H4 148 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 CBLN2Q8IUK8 224 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 NKAIN4Q8IVV8 208 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TBC1D21Q8IYX1 336 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 UBE2J2Q8N2K1 259 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 KCNG3Q8TAE7 436 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 SLC2A14Q8TDB8 520 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 RSPH1Q8WYR4 309 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ELMO1Q92556 727 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 HGDQ93099 445 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 SHANK2-AS3Q9BTD1 123 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 C1orf50Q9BV19 199 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TOLLIPQ9H0E2 274 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZNF442Q9H7R0 627 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 PLEKHF2Q9H8W4 249 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 EDA2RQ9HAV5 297 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TMEM27Q9HBJ8 222 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 TMEM165Q9HC07 324 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 MTCH1Q9NZJ7 389 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 SLC17A7Q9P2U7 560 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 MMACHCQ9Y4U1 282 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ASB3Q9Y575 518 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZBED9Q6R2W3 1325 aa0.85□□□□□ -2.27
RNU6-541P-201ENST00000384709 ARHGAP32A7KAX9 2087 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 MDC1Q14676 2089 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 IGKV1-27A0A075B6S5 117 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 IGHV1-69DA0A0B4J2H0 117 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 GABRR3A8MPY1 467 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 POLR1CO15160 346 aaPredicted RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 NVLO15381 856 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 CHMP2AO43633 222 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR7C2O60412 319 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 ARG1P05089 322 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 HRES1P13985 223 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 NELFEP18615 380 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 HNRNPH3P31942 346 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 SLC1A1P43005 524 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 SYKP43405 635 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 ACLYP53396 1101 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 ZNF121P58317 390 aaPredicted RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 ELF3P78545 371 aaPredicted RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 TGM3Q08188 693 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 RBMY1FQ15415 496 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 TMEM69Q5SWH9 247 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 MED27Q6P2C8 311 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 WDR59Q6PJI9 974 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 MBOAT2Q6ZWT7 520 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 USP50Q70EL3 339 aaPredicted RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 NBPF5PQ86XG9 351 aaPredicted RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 NECAB1Q8N987 351 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 SLC26A10Q8NG04 563 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR6Q1Q8NGQ2 317 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 OR1L1Q8NH94 360 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms