RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RBM14Q96PK6 669 aaKnown RBP-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 SLC38A2Q96QD8 506 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 TMEM243Q9BU79 118 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 SAMD10Q9BYL1 202 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 CXCL16Q9H2A7 254 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 THAP9Q9H5L6 903 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF160Q9HCG1 818 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 RAB18Q9NP72 206 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 TMEM9BQ9NQ34 198 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 OR2S2Q9NQN1 319 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 POLE4Q9NR33 117 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 SMOXQ9NWM0 555 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 PDP1Q9P0J1 537 aaPredicted RBP-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 MTFP1Q9UDX5 166 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 IL19Q9UHD0 177 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 ACOT9Q9Y305 439 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 LRRC42Q9Y546 428 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 PNPLA6Q8IY17 1366 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 NAV3Q8IVL0 2385 aa-0.11□□□□□ -2.43
SNORD28-201ENST00000384706 BRCA1P38398 1863 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 DENND4AQ7Z401 1863 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CRB1P82279 1406 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TECTAO75443 2155 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 FN1P02751 2386 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 NUP205Q92621 2012 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TRGV2A0A075B6R0 118 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 IGHV1-69DA0A0B4J2H0 117 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MBLAC1A4D2B0 266 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 RGSL1A5PLK6 1076 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CENPBD1B2RD01 187 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PLPP1O14494 284 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GOSR2O14653 212 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PRRG1O14668 218 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SLC31A1O15431 190 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SOX15O60248 233 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SLC19A2O60779 497 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MFN2O95140 757 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CLIC3O95833 236 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 IGHV3-53P01767 116 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GPX1P07203 203 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 HSP90AA1P07900 732 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 OR5AC1P0C628 307 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CALCBP10092 127 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF43P17038 809 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 HOXB8P17481 243 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 NELFEP18615 380 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GGT1P19440 569 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 HLA-DPA1P20036 260 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PRPHP41219 470 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MAGEA12P43365 314 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 YAP1P46937 504 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ERFP50548 548 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 DUSP3P51452 185 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 YBEYP58557 167 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TAS2R46P59540 309 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 YWHAGP61981 247 aaKnown RBP eCLIP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CTAG1AP78358 180 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MRPL28Q13084 256 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PDZK1IP1Q13113 114 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SELPLGQ14242 412 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF266Q14584 549 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TATDN3Q17R31 274 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 DEFB115Q30KQ5 88 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TMEM176BQ3YBM2 270 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 USH1GQ495M9 461 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF678Q5SXM1 525 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 C9orf135Q5VTT2 229 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GPR107Q5VW38 600 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SLC25A25Q6KCM7 469 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 OPN5Q6U736 354 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ISLR2Q6UXK2 745 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 RBM43Q6ZSC3 357 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ZNF767PQ75MW2 155 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 FA2HQ7L5A8 372 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TICAM2Q86XR7 235 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 LYPD6Q86Y78 171 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GID4Q8IVV7 300 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 BBS7Q8IWZ6 715 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CDH26Q8IXH8 852 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CPNE9Q8IYJ1 553 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CENPLQ8N0S6 344 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ORMDL3Q8N138 153 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MFSD9Q8NBP5 474 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 C11orf72Q8NBR9 251 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 OR1L1Q8NH94 360 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 RHEBL1Q8TAI7 183 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 UBE2Q2Q8WVN8 375 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 THRSPQ92748 146 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 YIPF5Q969M3 257 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PKNOX2Q96KN3 472 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PANX2Q96RD6 677 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 TRIB3Q96RU7 358 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ATP6V0BQ99437 205 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CNN2Q99439 309 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MICU1Q9BPX6 476 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SPZ1Q9BXG8 430 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 MS4A8Q9BY19 250 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 PRORYQ9H606 182 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CYP3A43Q9HB55 503 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 DDX18Q9NVP1 670 aaKnown RBP-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms