RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NKPD1Q17RQ9 610 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 SLC25A30Q5SVS4 291 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 ZNF691Q5VV52 312 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 MEDAGQ5VYS4 303 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 MBNL2Q5VZF2 373 aaKnown RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 DRAM2Q6UX65 266 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 COLCA1Q6ZS62 124 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 Q71RC1 249 aaPredicted RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 ZCCHC24Q8N2G6 241 aaKnown RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 ZNF283Q8N7M2 679 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 RHOXF1Q8NHV9 184 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 APH1BQ8WW43 257 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 SORCS2Q96PQ0 1159 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 SMR3AQ99954 134 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 VRK1Q99986 396 aaPredicted RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 RHNO1Q9BSD3 238 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 CLN6Q9NWW5 311 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 TAAR3PQ9P1P4 343 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 LRP12Q9Y561 859 aa13.84□□□□□ -0.19
SNRPB-201ENST00000381342 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
SNRPB-201ENST00000381342 ZNF670-ZNF695F2Z2N8 137 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 H3BSA7 217 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 MPZL2O60487 215 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 ADRA2AP08913 450 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 GNAO1P09471 354 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 SLC15A1P46059 708 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 MTNR1AP48039 350 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 EVX1P49640 407 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 PRSS12P56730 875 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 CXCR4P61073 352 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 POU4F2Q12837 409 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 TMED1Q13445 227 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 HLXQ14774 488 aaPredicted RBP13.83□□□□□ -0.2
SNRPB-201ENST00000381342 SNCBQ16143 134 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 SSX6Q7RTT6 188 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 C1orf174Q8IYL3 243 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
SNRPB-201ENST00000381342 CNIH3Q8TBE1 160 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 RNFT2Q96EX2 444 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 COG8Q96MW5 612 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 TPK1Q9H3S4 243 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 SLCO1C1Q9NYB5 712 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 N6AMT1Q9Y5N5 214 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 TMEM14AQ9Y6G1 99 aa13.83□□□□□ -0.2
SNRPB-201ENST00000381342 VPS13CQ709C8 3753 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 SSX4O60224 188 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 WBP4O75554 376 aaKnown RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 LY6HO94772 140 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 LY6G6DO95868 133 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 IGHV3-13P01766 116 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 ANXA2P07355 339 aaKnown RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 ATP6V1E1P36543 226 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF121P58317 390 aaPredicted RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 DSCR9P59020 149 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 SELENOVP59797 346 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 KCTD18Q6PI47 426 aaPredicted RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 CLEC2AQ6UVW9 174 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 OR10H4Q8NGA5 316 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 OR5L1Q8NGL2 311 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 OR2AE1Q8NHA4 323 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 ASB17Q8WXJ9 295 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 OR8B4Q96RC9 309 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 BRD7Q9NPI1 651 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 FBXO9Q9UK97 447 aaPredicted RBP13.82□□□□□ -0.2
SNRPB-201ENST00000381342 IKZF2Q9UKS7 526 aa13.82□□□□□ -0.2
SNRPB-201ENST00000381342 C2CD3Q4AC94 2353 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 H0YAE9 185 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 MAGEB4O15481 346 aaPredicted RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 TBX1O43435 398 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 TIMM8AO60220 97 aaPredicted RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 DBTP11182 482 aaKnown RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 NAT2P11245 290 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 PSMA6P60900 246 aaKnown RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 PSG7Q13046 419 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 C6orf52Q5T4I8 152 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 ZNF322Q6U7Q0 402 aaPredicted RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 FBXW12Q6X9E4 464 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 FAM57BQ71RH2 274 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 RHOUQ7L0Q8 258 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 SETD9Q8NE22 299 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 SNX33Q8WV41 574 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 CMBLQ96DG6 245 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 MNTQ99583 582 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 AMBNQ9NP70 447 aa13.81□□□□□ -0.2
SNRPB-201ENST00000381342 PURGQ9UJV8 347 aaKnown RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
SNRPB-201ENST00000381342 ACANP16112 2415 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 A0A1W2PQL4 384 aaPredicted RBP13.8□□□□□ -0.2
SNRPB-201ENST00000381342 SNTNA6NMZ2 147 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 RNF223E7ERA6 249 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 PHYHO14832 338 aa13.8□□□□□ -0.2
SNRPB-201ENST00000381342 OR2T7P0C7T2 308 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms