RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CDC42P60953 191 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 GRB2P62993 217 aaKnown RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 ROM1Q03395 351 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 RIN1Q13671 783 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 SPRNQ5BIV9 151 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 OGFRL1Q5TC84 451 aaPredicted RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 LCN1P1Q5VSP4 162 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 SPATC1Q76KD6 591 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 GID4Q8IVV7 300 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 ZNF786Q8N393 782 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 FAM81AQ8TBF8 368 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 SPSB4Q96A44 273 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 RDH12Q96NR8 316 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 MYOZ1Q9NP98 299 aaPredicted RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 FAM118AQ9NWS6 357 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 PTTG3PQ9NZH4 202 aa12.59□□□□□ -0.39
VCX3B-201ENST00000381029 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
VCX3B-201ENST00000381029 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.39
VCX3B-201ENST00000381029 ERICH4A6NGS2 130 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 IQCF6A8MYZ5 107 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 LYNX1G3V0Z9 82 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 J3QRE1 110 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 LCATP04180 440 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 CD55P08174 381 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 CSF3P09919 207 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 SBK2P0C263 348 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 LYNX1P0DP58 116 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 SLC2A1P11166 492 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 DAOP14920 347 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 PRSS12P56730 875 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
VCX3B-201ENST00000381029 ZNF92Q03936 586 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 TMED1Q13445 227 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 OCLNQ16625 522 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 MOGQ16653 247 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 PCGF3Q3KNV8 242 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 FAM209AQ5JX71 171 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 OR2T2Q6IF00 324 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 ENTHD1Q8IYW4 607 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 FAM168AQ92567 244 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
VCX3B-201ENST00000381029 MSL2Q9HCI7 577 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
VCX3B-201ENST00000381029 AASSQ9UDR5 926 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 WARS2Q9UGM6 360 aaKnown RBP12.58□□□□□ -0.4
VCX3B-201ENST00000381029 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 ORC6Q9Y5N6 252 aa12.58□□□□□ -0.4
VCX3B-201ENST00000381029 CR1P17927 2039 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
VCX3B-201ENST00000381029 LOC100130705A0A1B0GUX0 176 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 NDUFS8O00217 210 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
VCX3B-201ENST00000381029 INHBBP09529 407 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 COL8A2P25067 703 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 LIPAP38571 399 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SLC15A1P46059 708 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 CX3CR1P49238 355 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 ZNF81P51508 661 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 ZNF121P58317 390 aaPredicted RBP12.57□□□□□ -0.4
VCX3B-201ENST00000381029 CCL8P80075 99 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 TRIP10Q15642 601 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 GLYATL3Q5SZD4 288 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 ZNF684Q5T5D7 378 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 DEGS2Q6QHC5 323 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 CLEC2AQ6UVW9 174 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 PACRGLQ8N7B6 248 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 OR2AE1Q8NHA4 323 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 UBASH3BQ8TF42 649 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 THEM6Q8WUY1 208 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SNX33Q8WV41 574 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 OR8B4Q96RC9 309 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SMR3AQ99954 134 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SLC30A2Q9BRI3 323 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 CYSLTR2Q9NS75 346 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 SMPD3Q9NY59 655 aaPredicted RBP12.57□□□□□ -0.4
VCX3B-201ENST00000381029 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
VCX3B-201ENST00000381029 MLNRO43193 412 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 TIMM8AO60220 97 aaPredicted RBP12.56□□□□□ -0.4
VCX3B-201ENST00000381029 ENTPD6O75354 484 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 SLC25A16P16260 332 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 DCTDP32321 178 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 NR4A2P43354 598 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 SLC6A9P48067 706 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 PDLIM4P50479 330 aa12.56□□□□□ -0.4
VCX3B-201ENST00000381029 PSMA6P60900 246 aaKnown RBP12.56□□□□□ -0.4
VCX3B-201ENST00000381029 LOXL1Q08397 574 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms