RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 BBS1Q8NFJ9 593 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 GATAD2BQ8WXI9 593 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 GTF3AQ92664 365 aaKnown RBP7.89□□□□□ -1.15
HMGN1-202ENST00000380747 STMN2Q93045 179 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 SPTSSAQ969W0 71 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 CMBLQ96DG6 245 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 COG8Q96MW5 612 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 RBM4BQ9BQ04 359 aaKnown RBP7.89□□□□□ -1.15
HMGN1-202ENST00000380747 COPS4Q9BT78 406 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 PNRC2Q9NPJ4 139 aaKnown RBP7.89□□□□□ -1.15
HMGN1-202ENST00000380747 ENOPH1Q9UHY7 261 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 STARD10Q9Y365 291 aa7.89□□□□□ -1.15
HMGN1-202ENST00000380747 USF3Q68DE3 2245 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PLSCR5A0PG75 271 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 ZAR1LA6NP61 321 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 C17orf100A8MU93 164 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 LYNX1G3V0Z9 82 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 H3BSA7 217 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PRODHO43272 600 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SPRY3O43610 288 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TLX2O43763 284 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PRKYO43930 277 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SELENOFO60613 162 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 HPXP02790 462 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 LCATP04180 440 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 ACSM4P0C7M7 580 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 LYNX1P0DP58 116 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TUBG1P23258 451 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 EPHA2P29317 976 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 MAGEB1P43366 347 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SLC6A9P48067 706 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF81P51508 661 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PRKXP51817 358 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TPTEP56180 551 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PSG7Q13046 419 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 APOFQ13790 326 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TSTQ16762 297 aaKnown RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 RSPO1Q2MKA7 263 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TMEM255AQ5JRV8 349 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TEX30Q5JUR7 227 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SLC35D3Q5M8T2 416 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 LCN1P1Q5VSP4 162 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SLX4IPQ5VYV7 408 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 C12orf73Q69YU5 71 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SHFQ7M4L6 423 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 NAA40Q86UY6 237 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TCEANCQ8N8B7 351 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 OR5L1Q8NGL2 311 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 OR10S1Q8NGN2 331 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 C10orf105Q8TEF2 133 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 APOBEC3DQ96AK3 386 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SLAMF6Q96DU3 332 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 OSBPL10Q9BXB5 764 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 MYOZ1Q9NP98 299 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 TUBG2Q9NRH3 451 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 PURGQ9UJV8 347 aaKnown RBP7.88□□□□□ -1.15
HMGN1-202ENST00000380747 N6AMT1Q9Y5N5 214 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 ORC6Q9Y5N6 252 aa7.88□□□□□ -1.15
HMGN1-202ENST00000380747 SVEP1Q4LDE5 3571 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 LOC390937A0A1W2PQ73 354 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ZSCAN5BA6NJL1 495 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF878C9JN71 531 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ANKRD65E5RJM6 399 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 M0R135 149 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 NDUFS8O00217 210 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 EI24O14681 340 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 SLC25A16P16260 332 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ATF4P18848 351 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 SLC2A5P22732 501 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 POLR2IP36954 125 aaKnown RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 NAA10P41227 235 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 MMP15P51511 669 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 CCL8P80075 99 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 MALLQ13021 153 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 GGTLC2Q14390 218 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 HLXQ14774 488 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 PCK2Q16822 640 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 PCGF3Q3KNV8 242 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 KRTAP27-1Q3LI81 207 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 DPY19L4Q7Z388 723 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 BCDIN3DQ7Z5W3 292 aaKnown RBP7.87□□□□□ -1.15
HMGN1-202ENST00000380747 TIGD4Q8IY51 512 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 OR5AS1Q8N127 324 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 PQLC1Q8N2U9 271 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 CBR4Q8N4T8 237 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF283Q8N7M2 679 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ST7LQ8TDW4 575 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 THEM6Q8WUY1 208 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 RDH5Q92781 318 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 HAVCR1Q96D42 359 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ZNF799Q96GE5 643 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 IL4I1Q96RQ9 567 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 ABHD6Q9BV23 337 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 GABARAPL3Q9BY60 117 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 MARCH7Q9H992 704 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 CYSLTR2Q9NS75 346 aa7.87□□□□□ -1.15
HMGN1-202ENST00000380747 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms