RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ARL14EPQ8N8R7 260 aaPredicted RBP8.43□□□□□ -1.06
PTPRA-204ENST00000380393 EXD3Q8N9H8 876 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM104Q8NE00 496 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 OR4K1Q8NGD4 311 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 OR6K2Q8NGY2 324 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 OR51I1Q9H343 314 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 MSGN1A6NI15 193 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 TOMM40O96008 361 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 GBAP04062 536 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 MMP11P24347 488 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 OPRD1P41143 372 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 RABIFP47224 123 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 MS4A13Q5J8X5 152 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
PTPRA-204ENST00000380393 RPTNQ6XPR3 784 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 SIRT6Q8N6T7 355 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 C1orf198Q9H425 327 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 Q9N2J8 555 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 RAB22AQ9UL26 194 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 SCN5AQ14524 2016 aa8.43□□□□□ -1.06
PTPRA-204ENST00000380393 A0A1B0GV50 99 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 H3BQ15 152 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 ARL6IP5O75915 188 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CTSLP07711 333 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 RHOQP17081 205 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 RPS15P62841 145 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 FDX2Q6P4F2 183 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 LKAAEAR1Q8TD35 194 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MEGF9Q9H1U4 602 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 STEAP1Q9UHE8 339 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 TRAV1-2A0A0B4J238 106 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 IGHV2-70DA0A0C4DH43 119 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 DAPL1A0PJW8 107 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CTSVO60911 334 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 KAT7O95251 611 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CYC1P08574 325 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CCKARP32238 428 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MMP16P51512 607 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 METAP1P53582 386 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 RAC3P60763 192 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MESP2Q0VG99 397 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 NOXRED1Q6NXP6 359 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OR10H4Q8NGA5 316 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OR2AP1Q8NGE2 309 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OR11L1Q8NGX0 322 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 SDSLQ96GA7 329 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MRPL22Q9NWU5 206 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 TAS2R8Q9NYW2 309 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 TRAV39A0A0B4J263 110 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 IFNL4K9M1U5 179 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 NUDT21O43809 227 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 BNIP3LO60238 219 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CDC40O60508 579 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CD3DP04234 171 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CD37P11049 281 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 FCARP24071 287 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 RPL4P36578 427 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 SLC6A9P48067 706 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 ARF6P62330 175 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 SNRPNP63162 240 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 YOD1Q5VVQ6 348 aaPredicted RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CNKSR3Q6P9H4 555 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 UMODL1-AS1Q8N2C9 162 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 ACOT4Q8N9L9 421 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OR4X1Q8NH49 305 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 CPT1CQ8TCG5 803 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 ADIPOR1Q96A54 375 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 GNRHR2Q96P88 292 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 HIST1H2AAQ96QV6 131 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MYADMQ96S97 322 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 C20orf144Q9BQM9 153 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 PBDC1Q9BVG4 233 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OR11A1Q9GZK7 315 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 SLC2A4RGQ9NR83 387 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 SEMA4GQ9NTN9 838 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 OSER1Q9NX31 292 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MTFP1Q9UDX5 166 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 HSF4Q9ULV5 492 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 ANGPT4Q9Y264 503 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 MRPS33Q9Y291 106 aaKnown RBP8.42□□□□□ -1.06
PTPRA-204ENST00000380393 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
PTPRA-204ENST00000380393 A0A087WWC5 75 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 LOC100289279A0A1B0GTE1 492 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 A0A1B0GV72 72 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 J3QLW9 94 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TRAPPC6AO75865 159 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ITGB2P05107 769 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF19P17023 458 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.41□□□□□ -1.067e-7■■■■□ 22.4
PTPRA-204ENST00000380393 SPRED2Q7Z698 418 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF101Q8IZC7 436 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 C15orf40Q8WUR7 153 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 REEP6Q96HR9 211 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 NDC1Q9BTX1 674 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 IL26Q9NPH9 171 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms