RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ZFHX4Q86UP3 3567 aa19.08■□□□□ 0.65
TRIM54-202ENST00000380075 CREBL2O60519 120 aaPredicted RBP19.08■□□□□ 0.64
TRIM54-202ENST00000380075 LPLP06858 475 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 RAB12Q6IQ22 244 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 C6orf15Q6UXA7 325 aaPredicted RBP19.08■□□□□ 0.64
TRIM54-202ENST00000380075 CFAP77Q6ZQR2 320 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 TMEM138Q9NPI0 162 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 HPF1Q9NWY4 346 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 LAMA5O15230 3695 aa19.08■□□□□ 0.64
TRIM54-202ENST00000380075 C1QTNF9BB2RNN3 333 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 C1QTNF9P0C862 333 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 CCL3P10147 92 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 GTF2F2P13984 249 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 CD82P27701 267 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 POU4F3Q15319 338 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 TGIF1Q15583 401 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF813Q6ZN06 617 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 CDH26Q8IXH8 852 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 OR5D14Q8NGL3 314 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 OR6N1Q8NGY5 312 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 FGGYQ96C11 551 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 TMEM41AQ96HV5 264 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 RADILQ96JH8 1075 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 SGCZQ96LD1 299 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 GPR137Q96N19 417 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 BEX1Q9HBH7 125 aa19.07■□□□□ 0.64
TRIM54-202ENST00000380075 ERCC1P07992 297 aaPredicted RBP19.06■□□□□ 0.64
TRIM54-202ENST00000380075 QDPRP09417 244 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 ICAM2P13598 275 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 ZP1P60852 638 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 CSNK2A1P68400 391 aaPredicted RBP19.06■□□□□ 0.64
TRIM54-202ENST00000380075 TAF13Q15543 124 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF626Q68DY1 528 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 FAAP20Q6NZ36 180 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 DTX1Q86Y01 620 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 FAM109AQ8N4B1 249 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 CLEC1AQ8NC01 280 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 NAA11Q9BSU3 229 aaPredicted RBP19.06■□□□□ 0.64
TRIM54-202ENST00000380075 KCNK15Q9H427 330 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 PROK2Q9HC23 129 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 DKKL1Q9UK85 242 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 RAB22AQ9UL26 194 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 RHBDD3Q9Y3P4 386 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 SDK2Q58EX2 2172 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 DMXL2Q8TDJ6 3036 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 METTL21EPA6NDL7 271 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 AKR7A2O43488 359 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 SCGNO76038 276 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 RAD52P43351 418 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 TAS2R19P59542 299 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 LSM6P62312 80 aaKnown RBP19.06■□□□□ 0.64
TRIM54-202ENST00000380075 CARD17Q5XLA6 110 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF529Q6P280 563 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 SLC22A24Q8N4F4 322 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 MEIOBQ8N635 442 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 TMEM229BQ8NBD8 167 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 OR1M1Q8NGA1 313 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 MS4A3Q96HJ5 214 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 METTL17Q9H7H0 456 aaPredicted RBP19.06■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF160Q9HCG1 818 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 PADI1Q9ULC6 663 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 AHCTF1Q8WYP5 2266 aa19.06■□□□□ 0.64
TRIM54-202ENST00000380075 LOC101059948A0A1B0GTJ6 334 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 CBR3O75828 277 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 SNAPC5O75971 98 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 DNASE1P24855 282 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF133P52736 654 aaPredicted RBP19.05■□□□□ 0.64
TRIM54-202ENST00000380075 GRB2P62993 217 aaKnown RBP19.05■□□□□ 0.64
TRIM54-202ENST00000380075 RIPPLY1Q0D2K3 151 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 Q6ZTK2 550 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 NKD1Q969G9 470 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 DKK4Q9UBT3 224 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 CACNA1CQ13936 2221 aa19.05■□□□□ 0.64
TRIM54-202ENST00000380075 GJE1A6NN92 205 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 DOK2O60496 412 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 LMX1BO60663 402 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 RAMP1O60894 148 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 BPNT1O95861 308 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 MELTFP08582 738 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 RAB3AP20336 220 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GNALP38405 381 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GUCA1AP43080 201 aaPredicted RBP19.04■□□□□ 0.64
TRIM54-202ENST00000380075 CLDN17P56750 224 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 SNRPD2P62316 118 aaKnown RBP19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GUCA2AQ02747 115 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 MFAP5Q13361 173 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 RAET1LQ5VY80 246 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 STEAP1BQ6NZ63 245 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 ZNF627Q7L945 461 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 ESX1Q8N693 406 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 OR1J2Q8NGS2 313 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 SEH1LQ96EE3 360 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GINS4Q9BRT9 223 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GLTPQ9NZD2 209 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 DNPH1O43598 174 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 LIPCP11150 499 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 PMPCAQ10713 525 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 C10orf128Q5T292 105 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 UNQ6494/PRO21346Q6UXR6 183 aa19.04■□□□□ 0.64
TRIM54-202ENST00000380075 GNRHR2Q96P88 292 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms