RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SLC17A2O00624 439 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 GLSO94925 669 aaPredicted RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 DSCR4P56555 118 aaPredicted RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 CLDN17P56750 224 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 GRK1Q15835 563 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 SLC25A47Q6Q0C1 308 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 C6orf15Q6UXA7 325 aaPredicted RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 TMEM68Q96MH6 324 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 DKKL1Q9UK85 242 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 POLR1DQ9Y2S0 133 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 CTAG2O75638 210 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 ISG15P05161 165 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 ACHEP22303 614 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 DCTDP32321 178 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 MMP16P51512 607 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 FCN2Q15485 313 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 BEST4Q8NFU0 473 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 RBPMSQ93062 196 aaKnown RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 SLC25A28Q96A46 364 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 NTNG2Q96CW9 530 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 FLVCR2Q9UPI3 526 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 MRPS18BQ9Y676 258 aaKnown RBP13.17□□□□□ -0.3
PRNP-201ENST00000379440 U3KQ87 197 aa13.17□□□□□ -0.3
PRNP-201ENST00000379440 XRCC3O43542 346 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 TTRP02766 147 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ACSM4P0C7M7 580 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 H3F3AP84243 136 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ZNF239Q16600 458 aaKnown RBP13.16□□□□□ -0.3
PRNP-201ENST00000379440 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ASH2LQ9UBL3 628 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 TMEM272A0A1B0GTI8 110 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 PMS2P2O95744 297 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 FKBP2P26885 142 aaKnown RBP13.16□□□□□ -0.3
PRNP-201ENST00000379440 RAB13P51153 203 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 HIST3H3Q16695 136 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 KLHL24Q6TFL4 600 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 CLRN3Q8NCR9 226 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 FGGYQ96C11 551 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 PBOV1Q9GZY1 135 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 COPZ2Q9P299 210 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
PRNP-201ENST00000379440 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ANKRD20A5PA0PJZ0 165 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 DBX1A6NMT0 343 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ACOT7O00154 380 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 RER1O15258 196 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 F10P00742 488 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 FCER2P06734 321 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 RRASP10301 218 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 FSTP19883 344 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ZP3P21754 424 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ANOS1P23352 680 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 CFPP27918 469 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 HTR2CP28335 458 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 PRKXP51817 358 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 SCAND1P57086 179 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 POU4F3Q15319 338 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 GSG1Q2KHT4 349 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 TMEM244Q5VVB8 128 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
PRNP-201ENST00000379440 MED28Q9H204 178 aa13.16□□□□□ -0.3
PRNP-201ENST00000379440 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
PRNP-201ENST00000379440 PCSK5Q92824 1860 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 TRAV18A0A075B6X5 111 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 GGT3PA6NGU5 568 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 CBR3O75828 277 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 IGHEP01854 428 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 JMJD7P0C870 316 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 SLC2A1P11166 492 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 MNDAP41218 407 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 GUCA2AQ02747 115 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 JAGN1Q8N5M9 183 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 STRADBQ9C0K7 418 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
PRNP-201ENST00000379440 A0A0J9YW62 118 aa13.15□□□□□ -0.31
PRNP-201ENST00000379440 LOC102725191A0A1B0GVB3 256 aa13.15□□□□□ -0.31
PRNP-201ENST00000379440 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.31
PRNP-201ENST00000379440 MEIS3P1A6NDR6 274 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms