RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 HAO2Q9NYQ3 351 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 MYOTQ9UBF9 498 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SIGLEC7Q9Y286 467 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 TO15178 435 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 NTN1O95631 604 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 ZNF728P0DKX0 622 aa13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SUMO3P55854 103 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 SNTB1Q13884 538 aaKnown RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 ATPAF1Q5TC12 328 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-201ENST00000378156 HSPB6O14558 160 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 EPXP11678 715 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 KIR2DL1P43626 348 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-201ENST00000378156 PLGLAQ15195 96 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 FXNQ16595 210 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 BAGE3Q86Y29 109 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 BAGE2Q86Y30 109 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 TEX19Q8NA77 164 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 SEMA6DQ8NFY4 1073 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 LRRC3BQ96PB8 259 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 S1PR5Q9H228 398 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ARID2Q68CP9 1835 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 FOLR1P15328 257 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 RNF212Q495C1 297 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 KANSL1Q7Z3B3 1105 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 KCNRGQ8N5I3 272 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 VN1R1Q9GZP7 353 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 SLC5A6Q9Y289 635 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 MN1Q10571 1320 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-201ENST00000378156 CBR3O75828 277 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 NXPH2O95156 264 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 CELA2BP08218 269 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-201ENST00000378156 OMGP23515 440 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
NPHP4-201ENST00000378156 CAMK2BQ13554 666 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF425Q6IV72 752 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ABI3BPQ7Z7G0 1075 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF680Q8NEM1 530 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 ASB13Q8WXK3 278 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 A0A087WUJ7 227 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 CDC42EP2O14613 210 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 MPPED1O15442 326 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 IL9P15248 144 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 POU3F3P20264 500 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-201ENST00000378156 MPLP40238 635 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 LGI3Q8N145 548 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 KCNIP2Q9NS61 270 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 HDGFL3Q9Y3E1 203 aa13.58□□□□□ -0.24
NPHP4-201ENST00000378156 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 RAD52P43351 418 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 PMPCAQ10713 525 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TRA2AQ13595 282 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPHP4-201ENST00000378156 HNF4GQ14541 408 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 ACOT7LQ6ZUV0 252 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 BHLHE23Q8NDY6 225 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 OR51E1Q8TCB6 317 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 WDFY2Q96P53 400 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 ERVMER34-1Q9H9K5 563 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TAF9BQ9HBM6 251 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 HRASLSQ9HDD0 168 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 SLC22A13Q9Y226 551 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TIMM10BQ9Y5J6 103 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 RGS11O94810 467 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 GUSBP08236 651 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 UBE2MP61081 183 aaKnown RBP13.57□□□□□ -0.24
NPHP4-201ENST00000378156 FOXF1Q12946 379 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TBC1D28Q2M2D7 210 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 CD300LDQ6UXZ3 194 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 NAXDQ8IW45 347 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 PRSS35Q8N3Z0 413 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 C15orf54Q8N8G6 183 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 ANGPTL6Q8NI99 470 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 NKX3-1Q99801 234 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-201ENST00000378156 GNG12Q9UBI6 72 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 LPLP06858 475 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 HLA-DOBP13765 273 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 CBR1P16152 277 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TBXA2RP21731 343 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 ABCD3P28288 659 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 IL11RAQ14626 422 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TAAR9Q96RI9 348 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 CYSLTR2Q9NS75 346 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 RP1P56715 2156 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 JTBO76095 146 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 WNT11O96014 354 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TMPRSS11FQ6ZWK6 438 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 MOB1AQ9H8S9 216 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 FAM60AQ9NP50 221 aa13.57□□□□□ -0.24
NPHP4-201ENST00000378156 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 CLN5O75503 358 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 EPHA8P29322 1005 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-201ENST00000378156 PSMB3P49720 205 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms