RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IGHV2-5P01817 119 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 ANXA8P13928 327 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 POU1F1P28069 291 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 THBS2P35442 1172 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 TAF13Q15543 124 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 PCK2Q16822 640 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 SPRNQ5BIV9 151 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 TEX30Q5JUR7 227 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 ACSM5Q6NUN0 579 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF283Q8N7M2 679 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 PAPD5Q8NDF8 572 aaKnown RBP14.23□□□□□ -0.13
HMGN4-201ENST00000377575 OR10AD1Q8NGE0 317 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 OR10S1Q8NGN2 331 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 TEX12Q9BXU0 123 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 CADM1Q9BY67 442 aaKnown RBP14.23□□□□□ -0.13
HMGN4-201ENST00000377575 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 PPP1R3CQ9UQK1 317 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 NPTNQ9Y639 398 aa14.23□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF878C9JN71 531 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 IFNL4K9M1U5 179 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF593O00488 134 aaPredicted RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 DEAF1O75398 565 aaPredicted RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 CLUP10909 449 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 PSKH1P11801 424 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 OSMP13725 252 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 SRP14P37108 136 aaKnown RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 SRP9P49458 86 aaKnown RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 GK2Q14410 553 aaPredicted RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 DRAM2Q6UX65 266 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 PGAP1Q75T13 922 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 CXXC5Q7LFL8 322 aaKnown RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 MRPL21Q7Z2W9 205 aaKnown RBP14.22□□□□□ -0.13
HMGN4-201ENST00000377575 ZNF511Q8NB15 262 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 BHLHE23Q8NDY6 225 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 DNAJC9Q8WXX5 260 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 OTULINQ96BN8 352 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 SLAMF6Q96DU3 332 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 INTS14Q96SY0 518 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 MDFIQ99750 246 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 SLC30A2Q9BRI3 323 aa14.22□□□□□ -0.13
HMGN4-201ENST00000377575 FAM183AA6NL82 134 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 IGHV2-70P01814 119 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 HMGN1P05114 100 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 OTX1P32242 354 aaPredicted RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 SLC15A1P46059 708 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 GRB2P62993 217 aaKnown RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 GINS1Q14691 196 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 LINC01590Q5TEZ4 76 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 SHQ1Q6PI26 577 aaKnown RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 ERI1Q8IV48 349 aaKnown RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 HS3ST5Q8IZT8 346 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 SPICQ8N5J4 248 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 OR6N2Q8NGY6 317 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 SPRYD4Q8WW59 207 aaPredicted RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 NRBF2Q96F24 287 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 MEGF10Q96KG7 1140 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 KCNJ15Q99712 375 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 MMADHCQ9H3L0 296 aaPredicted RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 MED20Q9H944 212 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 CENPMQ9NSP4 180 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 TMEM100Q9NV29 134 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 UBAP1Q9NZ09 502 aa14.21□□□□□ -0.13
HMGN4-201ENST00000377575 NOP16Q9Y3C1 178 aaKnown RBP14.21□□□□□ -0.13
HMGN4-201ENST00000377575 FBN1P35555 2871 aaKnown RBP14.2□□□□□ -0.14
HMGN4-201ENST00000377575 PRR23D1E9PI22 279 aaPredicted RBP14.2□□□□□ -0.14
HMGN4-201ENST00000377575 GLCEO94923 617 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 PNPP00491 289 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 PRR23D2P0DMB1 279 aaPredicted RBP14.2□□□□□ -0.14
HMGN4-201ENST00000377575 GSTT1P30711 240 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 MMP16P51512 607 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 RAD23AP54725 363 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 BTG1P62324 171 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 EIF2B1Q14232 305 aaKnown RBP14.2□□□□□ -0.14
HMGN4-201ENST00000377575 NAA40Q86UY6 237 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 KLHL36Q8N4N3 616 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 TEX29Q8N6K0 151 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 ST7LQ8TDW4 575 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 SLCO4A1Q96BD0 722 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 PLEKHA8Q96JA3 519 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 TOR3AQ9H497 397 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 OPA3Q9H6K4 179 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 GCM1Q9NP62 436 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 PCDHB10Q9UN67 800 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 BOLA1Q9Y3E2 137 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 COL6A5A8TX70 2615 aa14.2□□□□□ -0.14
HMGN4-201ENST00000377575 A0A0G2JMP0 313 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 A0A0X1KG70 313 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 A0A1B0GWJ7 208 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 RNF212BA8MTL3 300 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 PHF1O43189 567 aaPredicted RBP14.19□□□□□ -0.14
HMGN4-201ENST00000377575 MLNRO43193 412 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 TIPRLO75663 272 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 PRKACGP22612 351 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 HSD11B1P28845 292 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SCGB2A2Q13296 93 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SNAI3Q3KNW1 292 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 TMEM155Q4W5P6 130 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
HMGN4-201ENST00000377575 SHFQ7M4L6 423 aa14.19□□□□□ -0.14
HMGN4-201ENST00000377575 DPY19L4Q7Z388 723 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms