RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CD36P16671 472 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 PAX7P23759 505 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 KIR3DL2P43630 455 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 SORDQ00796 357 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 SSX1Q16384 188 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 KRTAP27-1Q3LI81 207 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 DMKNQ6E0U4 476 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-203ENST00000377344 FDX2Q6P4F2 183 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 GHSRQ92847 366 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
CBWD3-203ENST00000377344 CRNNQ9UBG3 495 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-203ENST00000377344 PLPP2O43688 288 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 ZFPL1O95159 310 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 IGLV1-44P01699 117 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 THBDP07204 575 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 CCR9P51686 369 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 SSX8Q7RTT4 187 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 RDH10Q8IZV5 341 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 IL17RDQ8NFM7 739 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 OR8B12Q8NGG6 310 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
CBWD3-203ENST00000377344 KCNS3Q9BQ31 491 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 SP140LQ9H930 580 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 NDUFB11Q9NX14 153 aa11.22□□□□□ -0.61
CBWD3-203ENST00000377344 EIF3KQ9UBQ5 218 aaKnown RBP11.22□□□□□ -0.61
CBWD3-203ENST00000377344 NUFIP1Q9UHK0 495 aaKnown RBP11.22□□□□□ -0.61
CBWD3-203ENST00000377344 TMEM212A6NML5 194 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 PLA2G2AP14555 144 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 ANOS1P23352 680 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
CBWD3-203ENST00000377344 GPR50Q13585 617 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 GPR107Q5VW38 600 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 PRSS45Q7RTY3 260 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 OR52H1Q8NGJ2 320 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 ABHD4Q8TB40 342 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 PGLYRP3Q96LB9 341 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 OR10A2Q9H208 303 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 NGBQ9NPG2 151 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 NPDC1Q9NQX5 325 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF319Q9P2F9 582 aa11.21□□□□□ -0.61
CBWD3-203ENST00000377344 ADGRG4Q8IZF6 3080 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 C5orf63A6NC05 138 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 ACOD1A6NK06 481 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 OR4C45A6NMZ5 311 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 P2RY10O00398 339 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 NGFP01138 241 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 CRYAAP02489 173 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 TTRP02766 147 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 FAM157BP0CG42 384 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 TTKP33981 857 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 TGFBR2P37173 567 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 WNT5AP41221 380 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 NAAAQ02083 359 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 SEZ6L2Q6UXD5 910 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 TMEM108Q6UXF1 575 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF704Q6ZNC4 412 aaPredicted RBP11.21□□□□□ -0.62
CBWD3-203ENST00000377344 ELMOD2Q8IZ81 293 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF101Q8IZC7 436 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 OR13C5Q8NGS8 318 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 OR2AE1Q8NHA4 323 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 OR51E1Q8TCB6 317 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 APOBEC3DQ96AK3 386 aaPredicted RBP11.21□□□□□ -0.62
CBWD3-203ENST00000377344 RADILQ96JH8 1075 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 FUNDC2Q9BWH2 189 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 C1QTNF5Q9BXJ0 243 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF281Q9Y2X9 895 aa11.21□□□□□ -0.62
CBWD3-203ENST00000377344 IGHV2OR16-5A0A0B4J2B6 119 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 J3QKU1 62 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 GPRIN2O60269 458 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 UBCP0CG48 685 aaKnown RBP11.2□□□□□ -0.62
CBWD3-203ENST00000377344 NR4A1P22736 598 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 GADD45AP24522 165 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 PSMA1P25786 263 aaKnown RBP11.2□□□□□ -0.62
CBWD3-203ENST00000377344 CALCRP30988 508 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 GABRA5P31644 462 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-203ENST00000377344 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
CBWD3-203ENST00000377344 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
CBWD3-203ENST00000377344 LOC100506127A0A0U1RQW1 187 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 LOC107986453A0A1B0GWG9 222 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 DPPA5A6NC42 116 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 CASKO14936 926 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 ATE1O95260 518 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 CD1AP06126 327 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 RNF224P0DH78 156 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF35P13682 527 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 PTAFRP25105 342 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 CD40P25942 277 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 UCP2P55851 309 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 MALLQ13021 153 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 YIF1BQ5BJH7 314 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 RFPL4BQ6ZWI9 263 aa11.19□□□□□ -0.62
CBWD3-203ENST00000377344 MS4A15Q8N5U1 240 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms