RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 BTLAQ7Z6A9 289 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 PRDM7Q9NQW5 492 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 GNG13Q9P2W3 67 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 K7EQM0 130 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SLC17A1Q14916 467 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 GABRG3Q99928 467 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ZAR1LA6NP61 321 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 IMPA2O14732 288 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SSTP61278 116 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ZNF266Q14584 549 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 GSG1Q2KHT4 349 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 KTI12Q96EK9 354 aaPredicted RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 CTSVO60911 334 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 SIGLEC14Q08ET2 396 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 SLC25A26Q70HW3 274 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SLCO1C1Q9NYB5 712 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 ONECUT1Q9UBC0 465 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 DVL1O14640 695 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 Q6ZRG5 221 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 OR2Z1Q8NG97 314 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SEH1LQ96EE3 360 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 SEC22CQ9BRL7 303 aa12.31□□□□□ -0.44
GPC6-201ENST00000377047 PURGQ9UJV8 347 aaKnown RBP12.31□□□□□ -0.44
GPC6-201ENST00000377047 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
GPC6-201ENST00000377047 GLI4P10075 376 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 PRPH2P23942 346 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 OPRM1P35372 400 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 GPM6AP51674 278 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 DMRTC1Q5HYR2 192 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 HSD17B11Q8NBQ5 300 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 GABARAPL1Q9H0R8 117 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 A0A1B0GTL3 188 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 ELLP55199 621 aaPredicted RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 RAB1AP62820 205 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 PRSS41Q7RTY9 318 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 CT55Q8WUE5 264 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 SLC25A21Q9BQT8 299 aaPredicted RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 GABARAPL3Q9BY60 117 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 C11orf54Q9H0W9 315 aaPredicted RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 CCSO14618 274 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 TAF9Q16594 264 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 HIST2H3PS2Q5TEC6 136 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 PPT1P50897 306 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 B9D1Q9UPM9 204 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
GPC6-201ENST00000377047 CCR9P51686 369 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 RELAQ04206 551 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 PWWP2BQ6NUJ5 590 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 MTCH1Q9NZJ7 389 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
GPC6-201ENST00000377047 SNAPINO95295 136 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 DRD3P35462 400 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 ZNF117Q03924 483 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 RNPS1Q15287 305 aaKnown RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 PPIL1Q9Y3C6 166 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 SIX6O95475 246 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 TMEM200AQ86VY9 491 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 SLC25A19Q9HC21 320 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 ZNF225Q9UK10 706 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 ZNF816-ZNF321PA0A0X1KG74 233 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 AIPO00170 330 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 POU3F3P20264 500 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 DUSP1P28562 367 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 PPP1CAP62136 330 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 GALNT16Q8N428 558 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 SLC25A46Q96AG3 418 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 SOX18P35713 384 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 NKX2-1P43699 371 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 SLC35A2P78381 396 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms