RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RFPL4BQ6ZWI9 263 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 LINGO2Q7L985 606 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 CDC20BQ86Y33 519 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 OR2T4Q8NH00 348 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 FCAMRQ8WWV6 532 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 RASD2Q96D21 266 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 HAVCR1Q96D42 359 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 ZNF845Q96IR2 970 aaPredicted RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 GFI1Q99684 422 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 GLTPQ9NZD2 209 aa10.95□□□□□ -0.66
VRK3-202ENST00000377011 MRPS7Q9Y2R9 242 aaKnown RBP10.95□□□□□ -0.66
VRK3-202ENST00000377011 H3BML4 177 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 UPK3AO75631 287 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 ZFPL1O95159 310 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 ABHD16AO95870 558 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 MT-ND4P03905 459 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 CPN1P15169 458 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 PSMB10P40306 273 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 CENPAP49450 140 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 C17orf67Q0P5P2 114 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 ALG10Q5BKT4 473 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 ADGRE4PQ86SQ3 457 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 GGNQ86UU5 652 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 TIGD4Q8IY51 512 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 SPICQ8N5J4 248 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 DTX3Q8N9I9 347 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 OR51L1Q8NGJ5 315 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 MOSPD2Q8NHP6 518 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 PHOSPHO1Q8TCT1 267 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 CA5BP1Q8WTZ4 195 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 ZNRF4Q8WWF5 429 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 RGP1Q92546 391 aaPredicted RBP10.94□□□□□ -0.66
VRK3-202ENST00000377011 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
VRK3-202ENST00000377011 MAP6Q96JE9 813 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 TMEM185BQ9H7F4 350 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 HEXA-AS1Q9H8Q6 139 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 FKRPQ9H9S5 495 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 TCF7L1Q9HCS4 588 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 DLL4Q9NR61 685 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 KCNN3Q9UGI6 736 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 FOXJ3Q9UPW0 622 aa10.94□□□□□ -0.66
VRK3-202ENST00000377011 TRBV5-7A0A0A0MS05 114 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 A0A0B4J203 849 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 A0A1W2PPK0 400 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ANKRD20A5PA0PJZ0 165 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 TMEM212A6NML5 194 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 SCDO00767 359 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ZNF254O75437 659 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ACTL6AO96019 429 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 IL5P05113 134 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 DNASE1P24855 282 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
VRK3-202ENST00000377011 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
VRK3-202ENST00000377011 PTH2RP49190 550 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 CCR6P51684 374 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ART1P52961 327 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 DLX5P56178 289 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 NANOS3P60323 173 aaKnown RBP10.93□□□□□ -0.66
VRK3-202ENST00000377011 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 GRK1Q15835 563 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 PLPPR5Q32ZL2 321 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 NSUN5P2Q63ZY6 315 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 MTFR2Q6P444 385 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 FDX2Q6P4F2 183 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 OR5AK2Q8NH90 309 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 ZNF417Q8TAU3 575 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 KLHL15Q96M94 604 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 LAT2Q9GZY6 243 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 AUNIPQ9H7T9 357 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 UBQLN2Q9UHD9 624 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 CLEC4AQ9UMR7 237 aa10.93□□□□□ -0.66
VRK3-202ENST00000377011 MRPS18CQ9Y3D5 142 aaKnown RBP10.93□□□□□ -0.66
VRK3-202ENST00000377011 A0A1W2PQD3 144 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SNRPGP15A8MWD9 76 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 AHRRA9YTQ3 701 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 MAGEB4O15481 346 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 ZNF264O43296 627 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 HCRTR2O43614 444 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SSNA1O43805 119 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 TSC22D2O75157 780 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 RENP00797 406 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 HPGDP15428 266 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 AGAP20933 346 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 CHRNB4P30926 498 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 AQP2P41181 271 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 BLVRAP53004 296 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 CTXN1P60606 82 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 RAB14P61106 215 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 DHODHQ02127 395 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 FOXF1Q12946 379 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 HES5Q5TA89 166 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 TMEM211Q6ICI0 200 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 STAC2Q6ZMT1 411 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 FCRLAQ7L513 359 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SYT9Q86SS6 491 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 GCNT2Q8N0V5 402 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 OR8H3Q8N146 312 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms