RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 TINAGL1Q9GZM7 467 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 PBOV1Q9GZY1 135 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF700Q9H0M5 742 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 FSCN3Q9NQT6 498 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 SSNA1O43805 119 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 COX6A1P12074 109 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 MSX1P28360 303 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 PMS2CLQ68D20 193 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM123Q8N131 208 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 OR13C3Q8NGS6 347 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 OR6X1Q8NH79 312 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 DPCDQ9BVM2 203 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 GLTPQ9NZD2 209 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF69Q9UC07 566 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 FOXD3Q9UJU5 478 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-202ENST00000376659 HHLA2Q9UM44 414 aa8.49□□□□□ -1.05
TRIM39-202ENST00000376659 TRAV18A0A075B6X5 111 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 MEIS3P1A6NDR6 274 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 P2RY10O00398 339 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 SIGLEC6O43699 453 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 SCRG1O75711 98 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 RBBP9O75884 186 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 OR2J2O76002 312 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 BPNT1O95861 308 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 RPA2P15927 270 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 ZBTB25P24278 435 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 LAP3P28838 519 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF81P51508 661 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 AKR1D1P51857 326 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 ARHGDIBP52566 201 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 UBE2MP61081 183 aaKnown RBP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 DCDP81605 110 aaKnown RBP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 C21orf62-AS1Q17RA5 79 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 TRIM61Q5EBN2 209 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 C10orf128Q5T292 105 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 HLA-DQA1Q5Y7H0 255 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 DIABLOQ9NR28 239 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 OCIAD1Q9NX40 245 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 CELA2AP08217 269 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 NMBP08949 121 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 ALDH3B1P43353 468 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 GSK3AP49840 483 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 BIDP55957 195 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 SEC61A1P61619 476 aaKnown RBP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 OPCMLQ14982 345 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 POU4F3Q15319 338 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 PLAC9Q5JTB6 97 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 THEM4Q5T1C6 240 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 OR8H1Q8NGG4 311 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF230Q9UIE0 474 aaPredicted RBP8.48□□□□□ -1.05
TRIM39-202ENST00000376659 VDAC3Q9Y277 283 aa8.48□□□□□ -1.05
TRIM39-202ENST00000376659 TOR1AO14656 332 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF35P13682 527 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ADH6P28332 368 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 PRSS3P35030 304 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 CASRP41180 1078 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ZFP36L1Q07352 338 aaKnown RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 DAZAP2Q15038 168 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 C3orf33Q6P1S2 294 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 OR8B12Q8NGG6 310 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 WDR13Q9H1Z4 485 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NKIRAS2Q9NYR9 191 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 RPH3AQ9Y2J0 694 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 MRPS17Q9Y2R5 130 aaKnown RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 V9GYS6 101 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 TNRC6AQ8NDV7 1962 aaKnown RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 A8MXK9 166 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 RAD51DO75771 328 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 HEXBP07686 556 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 OR4E1P0C645 316 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF250P15622 560 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 TAS2R19P59542 299 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ACY1Q03154 408 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 TLE3Q04726 772 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ENDOGQ14249 297 aaKnown RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF660Q6AZW8 331 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 OR10K2Q6IF99 312 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NAXDQ8IW45 347 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SPACA9Q96E40 222 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 EMC6Q9BV81 110 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 LPAR5Q9H1C0 372 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SLCO5A1Q9H2Y9 848 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 CCDC163A0A0D9SF12 145 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NPIPA5E9PKD4 350 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 TOXO94900 526 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SIX6O95475 246 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 PMS2P2O95744 297 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NUDT14O95848 222 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 NFYAP23511 347 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SPOCK1Q08629 439 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 SCRN3Q0VDG4 424 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 GLT8D1Q68CQ7 371 aa8.47□□□□□ -1.05
TRIM39-202ENST00000376659 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms