RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PSMB6P28072 239 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 FMODQ06828 376 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 UNC119Q13432 240 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 OR4K17Q8NGC6 315 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 C12orf57Q99622 126 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 LAT2Q9GZY6 243 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 R4GMQ9 66 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 CABIN1Q9Y6J0 2220 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 MTRF1O75570 445 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 NSA2O95478 260 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 IL11P20809 199 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 NPBWR1P48145 328 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 ARRB1P49407 418 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 PNLIPRP2P54317 469 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 HSD17B7P56937 341 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 ZXDAP98168 799 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 C1orf100Q5SVJ3 147 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 H3F3CQ6NXT2 135 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 RNF144BQ7Z419 303 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 LYPD6Q86Y78 171 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 OR52N4Q8NGI2 321 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 OR4A4PQ8NGN8 299 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 TSLPQ969D9 159 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 PTGES2Q9H7Z7 377 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 TREM1Q9NP99 234 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 KIR2DS5A0A0G2JLQ3 304 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 A0A0G2JNG1 304 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 TMEM269A0A1B0GVZ9 245 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 MEGF11A6BM72 1044 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 METTL21EPA6NDL7 271 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 H0YIZ8 118 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 KIR2DS3K7RE56 304 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 CRHP06850 196 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 KIR2DS5Q14953 304 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 SGCBQ16585 318 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 C2CD4CQ8TF44 421 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 VSX1Q9NZR4 365 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 FAM96BQ9Y3D0 163 aa12.59□□□□□ -0.39
CLCNKA-202ENST00000375692 OR2T1O43869 369 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 NFYBP25208 207 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CD27P26842 260 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 GNALP38405 381 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 RAB13P51153 203 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM200AQ86VY9 491 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM151BQ8IW70 566 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 OR10R2Q8NGX6 335 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CYTL1Q9NRR1 136 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF107Q9UII5 783 aaPredicted RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 RAB22AQ9UL26 194 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 A0A0A6YYH2 397 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 MSGN1A6NI15 193 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 A6NJ64 397 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CD79AP11912 226 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CD1CP29017 333 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 GLO1Q04760 184 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 RAB11FIP2Q7L804 512 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 ZDHHC22Q8N966 263 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 ZSCAN4Q8NAM6 433 aaPredicted RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 SPACA5Q96QH8 159 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 CMSS1Q9BQ75 279 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 GPR27Q9NS67 375 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC5A6Q9Y289 635 aa12.58□□□□□ -0.4
CLCNKA-202ENST00000375692 TMED7-TICAM2A0A0A6YYA0 188 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 IGKV1D-43A0A0B4J1Z2 117 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 F8VVB4 439 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 F8VWA3 439 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 SSX5O60225 188 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 IFNA6P05013 189 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 GP1BBP13224 206 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 TPT1P13693 172 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 CTSEP14091 401 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 PI3P19957 117 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 CD38P28907 300 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 EIF1AXP47813 144 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 OR1D4P47884 311 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms