RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 RASL11AQ6T310 242 aa5.46□□□□□ -1.53
SCN2A-202ENST00000375427 ABRAQ8N0Z2 381 aa5.46□□□□□ -1.53
SCN2A-202ENST00000375427 BAALCQ8WXS3 180 aa5.46□□□□□ -1.53
SCN2A-202ENST00000375427 HSD17B8Q92506 261 aa5.46□□□□□ -1.53
SCN2A-202ENST00000375427 TRAV8-1A0A0A6YYK1 113 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 GLTPD2A6NH11 291 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 HOXB7P09629 217 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CD38P28907 300 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 GPLD1P80108 840 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 ABHD18Q0P651 414 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 TCF23Q7RTU1 214 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 DDA1Q9BW61 102 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MARCH2Q9P0N8 246 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 TCFL5Q9UL49 500 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MMP17Q9ULZ9 603 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 NPTNQ9Y639 398 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CPSF1Q10570 1443 aaKnown RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 GGTLC3B5MD39 225 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CST4P01036 141 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MALP21145 153 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 FPR3P25089 353 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 KDM5AP29375 1690 aaKnown RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 NOGQ13253 232 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SLC25A52Q3SY17 297 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 LYPD4Q6UWN0 246 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MEGF9Q9H1U4 602 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 DLL4Q9NR61 685 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CES1P1Q9UKY3 287 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MYO5AQ9Y4I1 1855 aaKnown RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 DPRXA6NFQ7 191 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 ST8SIA5O15466 376 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 NDUFS4O43181 175 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SPINT1O43278 529 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 HTRA2O43464 458 aaPredicted RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 LDB3O75112 727 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 PSMB10P40306 273 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SLC6A11P48066 632 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 ZNF841Q6ZN19 808 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 OR4F17Q8NGA8 305 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CNIH3Q8TBE1 160 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 DCAF5Q96JK2 942 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 EGLN3Q9H6Z9 239 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 NMUR1Q9HB89 426 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SERGEFQ9UGK8 458 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 USP21Q9UK80 565 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CLPSL1A2RUU4 121 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MT-CYBP00156 380 aaPredicted RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MBPP02686 304 aaPredicted RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 C1QTNF9P0C862 333 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 COL9A2Q14055 689 aaPredicted RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CT83Q5H943 113 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 RNF111Q6ZNA4 994 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 TBC1D10CQ8IV04 446 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 OR4X1Q8NH49 305 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SEC22AQ96IW7 307 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MAGIXQ9H6Y5 334 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 TRBV7-9A0A0J9YWB2 115 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 A0A1W2PP11 408 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 IGSF23A1L1A6 192 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 LINC00862A6NCI5 91 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 S1PR2O95136 353 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 C1QBP02746 253 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 VIPR2P41587 438 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 IRF9Q00978 393 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 RAB40BQ12829 278 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 PPP1R1AQ13522 171 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 C10orf128Q5T292 105 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CPZQ66K79 652 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CFAP161Q6P656 301 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 AGTRAPQ6RW13 159 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 UNQ5815/PRO19632Q6UWF5 114 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 PRELID2Q8N945 189 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 TMEM230Q96A57 120 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 NIPSNAP1Q9BPW8 284 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 MRPL20Q9BYC9 149 aaKnown RBP5.46□□□□□ -1.54
SCN2A-202ENST00000375427 AICDAQ9GZX7 198 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 SFXN1Q9H9B4 322 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 CHST11Q9NPF2 352 aa5.46□□□□□ -1.54
SCN2A-202ENST00000375427 APCSP02743 223 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 NDUFB7P17568 137 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 PSMB6P28072 239 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 CSNK1A1P48729 337 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 RPL7AP62424 266 aaKnown RBP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 FAM74A3Q4VXF1 159 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 STAC2Q6ZMT1 411 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 NUFIP2Q7Z417 695 aaKnown RBP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 AGBL5Q8NDL9 886 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 PCGF1Q9BSM1 259 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 DNAJC15Q9Y5T4 150 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 SMAD6O43541 496 aaKnown RBP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 GCAP28676 217 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 PLBD1Q6P4A8 553 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 USP50Q70EL3 339 aaPredicted RBP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 CSNK1A1LQ8N752 337 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 C12orf42Q96LP6 360 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 MUS81Q96NY9 551 aa5.45□□□□□ -1.54
SCN2A-202ENST00000375427 GEMIN7Q9H840 131 aaKnown RBP5.45□□□□□ -1.54
SCN2A-202ENST00000375427 NDUFB11Q9NX14 153 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms