RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SCGNO76038 276 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 FARS2O95363 451 aaKnown RBP18.86■□□□□ 0.61
UPF3A-202ENST00000375299 NUDT14O95848 222 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 VSIG8P0DPA2 414 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 HSD11B1P28845 292 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 GPR85P60893 370 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 SGCAQ16586 387 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 AWAT2Q6E213 333 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 ZNF585AQ6P3V2 769 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 DCXRQ7Z4W1 244 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 PTPMT1Q8WUK0 201 aaPredicted RBP18.86■□□□□ 0.61
UPF3A-202ENST00000375299 SLC46A1Q96NT5 459 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.86■□□□□ 0.61
UPF3A-202ENST00000375299 RHOFQ9HBH0 211 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 CACNA1IQ9P0X4 2223 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 OR2T1O43869 369 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 LYL1P12980 280 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 GP1BBP13224 206 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 MUC1P15941 1255 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-202ENST00000375299 ZNF823P16415 610 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 HHEXQ03014 270 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 PRSS54Q6PEW0 395 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 OR52N4Q8NGI2 321 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 OR4K15Q8NH41 348 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 ROBO4Q8WZ75 1007 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 FGGYQ96C11 551 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 HRH4Q9H3N8 390 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 FANCFQ9NPI8 374 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 PNO1Q9NRX1 252 aaKnown RBP18.85■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM184BQ9Y519 407 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM128Q5BJH2 165 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 ST7LQ8TDW4 575 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 ADAMTS17Q8TE56 1095 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 SAT2Q96F10 170 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-202ENST00000375299 GAS2L1Q99501 681 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-202ENST00000375299 F5P12259 2224 aa18.85■□□□□ 0.61
UPF3A-202ENST00000375299 LINC01387J3KSC0 135 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 PGCP20142 388 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 GSK3AP49840 483 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM31Q5JXX7 168 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 LINC00346Q8IVM7 164 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 SLC22A24Q8N4F4 322 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 CPNE2Q96FN4 548 aaPredicted RBP18.84■□□□□ 0.61
UPF3A-202ENST00000375299 MRGPRX1Q96LB2 322 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 CDCA3Q99618 268 aaPredicted RBP18.84■□□□□ 0.61
UPF3A-202ENST00000375299 NUDT16L1Q9BRJ7 211 aaKnown RBP18.84■□□□□ 0.61
UPF3A-202ENST00000375299 OR5AC2Q9NZP5 309 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 TMED7-TICAM2A0A0A6YYA0 188 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 PLPP3O14495 311 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 NPIPB7O75200 414 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 AKT2P31751 481 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 GNALP38405 381 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 CAV2P51636 162 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 TFF2Q03403 129 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 SWI5Q1ZZU3 235 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 RTN4RL2Q86UN3 420 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 SLC26A10Q8NG04 563 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 OR13H1Q8NG92 308 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 SMIM8Q96KF7 97 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 AQP10Q96PS8 301 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 OR8D2Q9GZM6 311 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 RAB18Q9NP72 206 aa18.84■□□□□ 0.61
UPF3A-202ENST00000375299 SFT2D2O95562 160 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 ZNF542PQ5EBM4 170 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 COL13A1Q5TAT6 717 aaPredicted RBP18.83■□□□□ 0.61
UPF3A-202ENST00000375299 C1orf140Q5VVS0 124 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 TERB2Q8NHR7 220 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM230Q96A57 120 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 GAL3ST4Q96RP7 486 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 MICU1Q9BPX6 476 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 OR2S2Q9NQN1 319 aa18.83■□□□□ 0.61
UPF3A-202ENST00000375299 MBTPS2O43462 519 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 EIF3GO75821 320 aaKnown RBP eCLIP18.83■□□□□ 0.6
UPF3A-202ENST00000375299 SLC26A5P58743 744 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 PEA15Q15121 130 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 SLC22A18ASQ8N1D0 253 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 BHLHE23Q8NDY6 225 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 ADIPOR1Q96A54 375 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 CRB3Q9BUF7 120 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 C5orf66Q9H5L9 145 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 PTGES2Q9H7Z7 377 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 RNF122Q9H9V4 155 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 PDE7BQ9NP56 450 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 ZMAT5Q9UDW3 170 aaKnown RBP18.83■□□□□ 0.6
UPF3A-202ENST00000375299 GPR132Q9UNW8 380 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 WIF1Q9Y5W5 379 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 FLVCR1Q9Y5Y0 555 aa18.83■□□□□ 0.6
UPF3A-202ENST00000375299 ADAP1O75689 374 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 FOLR2P14207 255 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 EN2P19622 333 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-202ENST00000375299 IL12BP29460 328 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 POLR2HP52434 150 aaKnown RBP18.82■□□□□ 0.6
UPF3A-202ENST00000375299 SLC9A3R2Q15599 337 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 DEGS2Q6QHC5 323 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 SZT2Q5T011 3432 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 PCNX3Q9H6A9 2034 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 EPOPA6NHQ4 379 aa18.82■□□□□ 0.6
UPF3A-202ENST00000375299 COLCA2A8K830 154 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms