RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 RNF157Q96PX1 679 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 ATG10Q9H0Y0 220 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 RNF121Q9H920 327 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 FBXO6Q9NRD1 293 aaPredicted RBP7.07□□□□□ -1.28
USP48-203ENST00000374732 ALKBH4Q9NXW9 302 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 B9D1Q9UPM9 204 aa7.07□□□□□ -1.28
USP48-203ENST00000374732 KIR2DL5BA0A0G2JN68 375 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 KIR2DL5BA0A0G2JPC4 375 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ZNF705GA8MUZ8 300 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 SYT7O43581 403 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ZNF207O43670 478 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 TPST1O60507 370 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ZNF205O95201 554 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST1H2AGP0C0S8 130 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 ACP5P13686 325 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 FOLR1P15328 257 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST1H2ADP20671 130 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 IDSP22304 550 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HTR1FP30939 366 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 SRD5A2P31213 254 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 NDUFA6P56556 154 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 WNT3P56703 355 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 NSDHLQ15738 373 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CTF1Q16619 201 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 LGALSLQ3ZCW2 172 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST2H2AA3Q6FI13 130 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP48-203ENST00000374732 KIR2DL5AQ8N109 375 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR51G2Q8NGK0 314 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 GPR148Q8TDV2 347 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 GALMQ96C23 342 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST1H2AHQ96KK5 128 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR2A14Q96R47 310 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 TRIB3Q96RU7 358 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST1H2AJQ99878 128 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 DPH1Q9BZG8 443 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 FAM49AQ9H0Q0 323 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 FGF21Q9NSA1 209 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 RIMS3Q9UJD0 308 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 TRAV30A0A087WSZ9 112 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 A0A0G2JND7 137 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 LRATO95237 230 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ACP2P11117 423 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CD79AP11912 226 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 TYRP14679 529 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 RPL4P36578 427 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 CD96P40200 585 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ELK3P41970 407 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 DNASE1L1P49184 302 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 BIDP55957 195 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 SNRPD1P62314 119 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 TMEM176BQ3YBM2 270 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 C9orf57Q5W0N0 161 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HIST2H2BDQ6DRA6 164 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CES5AQ6NT32 575 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 PDZD9Q8IXQ8 264 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 H1FOOQ8IZA3 346 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CD99L2Q8TCZ2 262 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 TMEM159Q96B96 161 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 PEBP4Q96S96 227 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 MRPL57Q9BQC6 102 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 MARVELD1Q9BSK0 173 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CDCP1Q9H5V8 836 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 INPP5EQ9NRR6 644 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR1A1Q9P1Q5 309 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 PEMTQ9UBM1 199 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR10H1Q9Y4A9 318 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ETV7Q9Y603 341 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 RBFOX2O43251 390 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP48-203ENST00000374732 DUSP11O75319 330 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 IFNW1P05000 195 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ADH4P08319 380 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 CST2P09228 141 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR13C7P0DN81 318 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 F2RP25116 425 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 HCCSP53701 268 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 PIGPP57054 158 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 LSM3P62310 102 aaKnown RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 CXADRP78310 365 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 VWC2Q2TAL6 325 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 FAM78BQ5VT40 261 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 STEAP4Q687X5 459 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 TRNP1Q6NT89 227 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 DEFB128Q7Z7B8 93 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 DTX1Q86Y01 620 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 ZNF738Q8NE65 137 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 LFNGQ8NES3 379 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 OR13G1Q8NGZ3 307 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 WIPF2Q8TF74 440 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 GALNT14Q96FL9 552 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
USP48-203ENST00000374732 GNRHR2Q96P88 292 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 GPR22Q99680 433 aa7.06□□□□□ -1.28
USP48-203ENST00000374732 SMIM3Q9BZL3 60 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms