RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 Q96M85 177 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 MKRN2OSH3BPM6 223 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 SOX15O60248 233 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 WDR1O75083 606 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 IGLV3-27P01718 113 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 FCGR2CP31995 323 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 AMTP48728 403 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF85Q03923 595 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 VASH2Q86V25 355 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CHST2Q9Y4C5 530 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 TIMM9Q9Y5J7 89 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 ANKRD61A6NGH8 418 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 SCO1O75880 301 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 LIPAP38571 399 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 TFAP2EQ6VUC0 442 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 RETREG3Q86VR2 466 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 SPACA5Q96QH8 159 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF385BQ569K4 471 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 FAM71E1Q6IPT2 247 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CA13Q8N1Q1 262 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CORO2AQ92828 525 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 FBXW5Q969U6 566 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 HES7Q9BYE0 225 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 LYRM4Q9HD34 91 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 SLC22A11Q9NSA0 550 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 WSB2Q9NYS7 404 aaPredicted RBP13.01□□□□□ -0.33
TRAF1-201ENST00000373887 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 GLULP15104 373 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 NME1P15531 152 aaKnown RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 PI3P19957 117 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 PIGAP37287 484 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 GFRALQ6UXV0 394 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 FAM96BQ9Y3D0 163 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF787Q6DD87 383 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 C17orf107Q6ZR85 190 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ZDHHC19Q8WVZ1 309 aaPredicted RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 SEH1LQ96EE3 360 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ACTR3CQ9C0K3 210 aaPredicted RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF71Q9NQZ8 489 aaPredicted RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 SMIM17P0DL12 118 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 CPEP16870 476 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 TAS2R45P59539 299 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 SNRPNP63162 240 aaKnown RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 LAMA4Q16363 1823 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 TARM1B6A8C7 271 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 DSCR3O14972 297 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 FAM157BP0CG42 384 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 SPI1P17947 270 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 GLRA1P23415 457 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 RPS19P39019 145 aaKnown RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 BAMBIQ13145 260 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 IL10RAQ13651 578 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 C11orf40Q8WZ69 217 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 RDH5Q92781 318 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 NEURL3Q96EH8 262 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 PLSCR3Q9NRY6 295 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 SLC17A4Q9Y2C5 497 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 RFPL4AA6NLU0 287 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 PRSS44E7EML9 344 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 RFPL4AL1F8VTS6 287 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 CD14P08571 375 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ADRB1P08588 477 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 H3F3AP84243 136 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 CDK5Q00535 292 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 PMP22Q01453 160 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
TRAF1-201ENST00000373887 CMBLQ96DG6 245 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ASB1Q9Y576 335 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 KLK4Q9Y5K2 254 aa13□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ANKUB1A6NFN9 424 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 SH2D1BO14796 132 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TGOLN2O43493 480 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 MRPL19P49406 292 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 H1FNTQ75WM6 255 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TSEN54Q7Z6J9 526 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF583Q96ND8 569 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF629Q9UEG4 869 aaPredicted RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 PROCRQ9UNN8 238 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
TRAF1-201ENST00000373887 ANKRD12Q6UB98 2062 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 MEIKINA0A087WXM9 373 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 C5orf49A4QMS7 147 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 HRO43593 1189 aa12.99□□□□□ -0.33
TRAF1-201ENST00000373887 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms