RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MAGEA5P43359 124 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 LHX2P50458 406 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 CBX3Q13185 183 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 COMMD2Q86X83 199 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 GALNT16Q8N428 558 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 MDS2Q8NDY4 140 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 OR4D6Q8NGJ1 314 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 ABHD3Q8WU67 409 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 FOXRED1Q96CU9 486 aaPredicted RBP17.24■□□□□ 0.35
HDAC1-201ENST00000373548 FBXO17Q96EF6 278 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 COPZ2Q9P299 210 aa17.24■□□□□ 0.35
HDAC1-201ENST00000373548 RTTNQ86VV8 2226 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 ANKRD20A5PA0PJZ0 165 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 C5orf63A6NC05 138 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 E9PLN8 166 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 CCL1P22362 96 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 CD82P27701 267 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 KCNJ8Q15842 424 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 TMEM255AQ5JRV8 349 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 PDSS1Q5T2R2 415 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 TMEM251Q8N6I4 163 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 OR52N4Q8NGI2 321 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 OR5D14Q8NGL3 314 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 OR13C9Q8NGT0 318 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 ATG5Q9H1Y0 275 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 SLC6A15Q9H2J7 730 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 CRLF2Q9HC73 371 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 TMEM138Q9NPI0 162 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 TRAV18A0A075B6X5 111 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 GMDSO60547 372 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 AP3S2P59780 193 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 RSPO1Q2MKA7 263 aaPredicted RBP17.23■□□□□ 0.35
HDAC1-201ENST00000373548 GALNTL5Q7Z4T8 443 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 ADGRE4PQ86SQ3 457 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 FAM71F1Q96KD3 344 aaPredicted RBP17.23■□□□□ 0.35
HDAC1-201ENST00000373548 SORCS2Q96PQ0 1159 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 ALKBH3Q96Q83 286 aaPredicted RBP17.23■□□□□ 0.35
HDAC1-201ENST00000373548 BEX2Q9BXY8 128 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 CNTD2Q9H8S5 307 aa17.23■□□□□ 0.35
HDAC1-201ENST00000373548 RANGRFQ9HD47 186 aaPredicted RBP17.23■□□□□ 0.35
HDAC1-201ENST00000373548 ARGFXA6NJG6 315 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 NME2P1O60361 137 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 SP1P08047 785 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 GABRA1P14867 456 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 ABOP16442 354 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 ZNF20P17024 532 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 NME2P22392 152 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 CLDN18P56856 261 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 TCF15Q12870 199 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 ELFN2Q5R3F8 820 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 GPR137CQ8N3F9 429 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 DMRTB1Q96MA1 342 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 NEK6Q9HC98 313 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 TMEM38BQ9NVV0 291 aa17.22■□□□□ 0.35
HDAC1-201ENST00000373548 A6NL46 340 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 F5H5K5 113 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 RAB3AP20336 220 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 OTX1P32242 354 aaPredicted RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 RRAS2P62070 204 aaPredicted RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 SRYQ05066 204 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 GFOD2Q3B7J2 385 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 OR10K2Q6IF99 312 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 SLC25A25Q6KCM7 469 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 BTN2A1Q7KYR7 527 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 CPT1CQ8TCG5 803 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 PHF21AQ96BD5 680 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 FYTTD1Q96QD9 318 aaKnown RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 MYEF2Q9P2K5 600 aaKnown RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 KLF13Q9Y2Y9 288 aaPredicted RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 ZNF407Q9C0G0 2248 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 A0A0A6YYJ9 748 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 PRR33A8MZF0 331 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 DHFRP00374 187 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 GSTT2BP0CG30 244 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 SDHBP21912 280 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 MEOX1P50221 254 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 CD83Q01151 205 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 PLGLB1Q02325 96 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 OLFML2AQ68BL7 652 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 SFRP4Q6FHJ7 346 aaPredicted RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 DOK3Q7L591 496 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 SCMH1Q96GD3 660 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 PGAM5Q96HS1 289 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
HDAC1-201ENST00000373548 ASCL3Q9NQ33 180 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 PLEK2Q9NYT0 353 aa17.21■□□□□ 0.35
HDAC1-201ENST00000373548 C7orf66A4D0T2 115 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 NAP1L6A6NFF2 107 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 H7C417 338 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 IGLV3-1P01715 115 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 ZNF708P17019 499 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 GUCA2AQ02747 115 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.2■□□□□ 0.34
HDAC1-201ENST00000373548 SLC22A24Q8N4F4 322 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 LYZL4Q96KX0 146 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 GAL3ST1Q99999 423 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 METTL17Q9H7H0 456 aaPredicted RBP17.2■□□□□ 0.34
HDAC1-201ENST00000373548 MTFP1Q9UDX5 166 aa17.2■□□□□ 0.34
HDAC1-201ENST00000373548 ALDOBP05062 364 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms