RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
TRAPPC3-201ENST00000373159 LHFPL6Q9Y693 200 aa10.86□□□□□ -0.67
TRAPPC3-201ENST00000373159 HMGB1P1B2RPK0 211 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 SOCS2O14508 198 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 FAM20BO75063 409 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 CLPXO76031 633 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 TOX4O94842 621 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 SFTPBP07988 381 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 CDKN2AP42771 156 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 ECH1Q13011 328 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 GK2Q14410 553 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 MPPED2Q15777 294 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 KCNJ8Q15842 424 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 FKBP9P1Q75LS8 142 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 CBLL1Q75N03 491 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 TSEN54Q7Z6J9 526 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 C19orf18Q8NEA5 215 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 LINC01006Q8NI28 216 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 FAM46AQ96IP4 442 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 WDFY2Q96P53 400 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 TBX15Q96SF7 602 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 RBM4BQ9BQ04 359 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 TRIM15Q9C019 465 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 SLC22A4Q9H015 551 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 CMTM6Q9NX76 183 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 ERVK-18Q9QC07 812 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 RNF7Q9UBF6 113 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
TRAPPC3-201ENST00000373159 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 LGALS8O00214 317 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 DCTN6O00399 190 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 CXCR6O00574 342 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 NDUFA2O43678 99 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 PTBP3O95758 552 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 ZNF682O95780 498 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 ACSM4P0C7M7 580 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 MDH1P40925 334 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 RPS6KA3P51812 740 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 MALLQ13021 153 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 DGCR6Q14129 220 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 TAF9Q16594 264 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 MEP1BQ16820 701 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 C11orf91Q3C1V1 193 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 DNM1P34Q6PK57 102 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 CORO6Q6QEF8 472 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 SLC15A3Q8IY34 581 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 PNLDC1Q8NA58 520 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 PLPP7Q8NBV4 271 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 SLCO4A1Q96BD0 722 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 TSSK2Q96PF2 358 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 UFSP2Q9NUQ7 469 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 ACOXLQ9NUZ1 547 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 CTSZQ9UBR2 303 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 B9D1Q9UPM9 204 aa10.84□□□□□ -0.67
TRAPPC3-201ENST00000373159 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 GPR137BO60478 399 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 GMDSO60547 372 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 IER3P46695 156 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 OMPP47874 163 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 CENPAP49450 140 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 PRSS12P56730 875 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 PROK1P58294 105 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 LIPEQ05469 1076 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 PGAP1Q75T13 922 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 ARPINQ7Z6K5 226 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 NAA40Q86UY6 237 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 OR6V1Q8N148 313 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 SLC26A10Q8NG04 563 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 SPRYD4Q8WW59 207 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 TECTBQ96PL2 329 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 PKP2Q99959 881 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 FN3KRPQ9HA64 309 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 SRA1Q9HD15 236 aaKnown RBP10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 TRIM36Q9NQ86 728 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 GMPR2Q9P2T1 348 aaKnown RBP10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 ENPP4Q9Y6X5 453 aa10.83□□□□□ -0.68
TRAPPC3-201ENST00000373159 TRAV38-1A0A0B4J264 116 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 UNC119BA6NIH7 251 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 F5H5K5 113 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 ECDO95905 644 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 SERPINA1P01009 418 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 LCATP04180 440 aa10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 H1F0P07305 194 aaKnown RBP10.82□□□□□ -0.68
TRAPPC3-201ENST00000373159 CA6P23280 308 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms