RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SLC2A1P11166 492 aa22■■□□□ 1.11
CTSA-203ENST00000372459 POU3F4P49335 361 aa22■■□□□ 1.11
CTSA-203ENST00000372459 NOVA1P51513 510 aaKnown RBP22■■□□□ 1.11
CTSA-203ENST00000372459 GALK2Q01415 458 aa22■■□□□ 1.11
CTSA-203ENST00000372459 SRSF6Q13247 344 aaKnown RBP22■■□□□ 1.11
CTSA-203ENST00000372459 GPR176Q14439 515 aa22■■□□□ 1.11
CTSA-203ENST00000372459 SLC36A2Q495M3 483 aa22■■□□□ 1.11
CTSA-203ENST00000372459 RNASE12Q5GAN4 147 aaKnown RBP22■■□□□ 1.11
CTSA-203ENST00000372459 RIPPLY2Q5TAB7 128 aa22■■□□□ 1.11
CTSA-203ENST00000372459 GLCCI1Q86VQ1 547 aa22■■□□□ 1.11
CTSA-203ENST00000372459 SCMH1Q96GD3 660 aa22■■□□□ 1.11
CTSA-203ENST00000372459 CACNG2Q9Y698 323 aa22■■□□□ 1.11
CTSA-203ENST00000372459 LOC100289279A0A1B0GTE1 492 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 A0A1B0GTI1 187 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 TPPPO94811 219 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 SYNGR4O95473 234 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 CDK2P24941 298 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 HTR2CP28335 458 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 ERP29P30040 261 aaKnown RBP21.99■■□□□ 1.11
CTSA-203ENST00000372459 GNALP38405 381 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 MNDAP41218 407 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 SPOCK1Q08629 439 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 ZNF766Q5HY98 468 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 ELFN2Q5R3F8 820 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 ABHD12BQ7Z5M8 362 aaPredicted RBP21.99■■□□□ 1.11
CTSA-203ENST00000372459 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.99■■□□□ 1.11
CTSA-203ENST00000372459 COMMD2Q86X83 199 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 TMEM178AQ8NBL3 297 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 FOXRED1Q96CU9 486 aaPredicted RBP21.99■■□□□ 1.11
CTSA-203ENST00000372459 IGKV3D-15A0A087WSY6 115 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 C2orf76Q3KRA6 126 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 FAM109AQ8N4B1 249 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 OR6M1Q8NGM8 313 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 OR1J2Q8NGS2 313 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 ALKBH3Q96Q83 286 aaPredicted RBP21.99■■□□□ 1.11
CTSA-203ENST00000372459 ACKR4Q9NPB9 350 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 TMEM38BQ9NVV0 291 aa21.99■■□□□ 1.11
CTSA-203ENST00000372459 PTH2RP49190 550 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 SRP9P49458 86 aaKnown RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 BTG1P62324 171 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 MRPS10P82664 201 aaKnown RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 SLC10A1Q14973 349 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 GLYATL3Q5SZD4 288 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 FAM57BQ71RH2 274 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 OR5D14Q8NGL3 314 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 BEX2Q9BXY8 128 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 MCTS1Q9ULC4 181 aaKnown RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 DCDC2BA2VCK2 349 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 GABARAPH6UMI1 98 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 ACOT7O00154 380 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 ARSBP15848 533 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 SLC6A1P30531 599 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 ANKRD16Q6P6B7 361 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 JAGN1Q8N5M9 183 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 SLC25A28Q96A46 364 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 FBXO17Q96EF6 278 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 ADAT3Q96EY9 351 aaPredicted RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 SLC17A5Q9NRA2 495 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 PLEK2Q9NYT0 353 aa21.98■■□□□ 1.11
CTSA-203ENST00000372459 CGGBP1Q9UFW8 167 aaPredicted RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 NOSIPQ9Y314 301 aaKnown RBP21.98■■□□□ 1.11
CTSA-203ENST00000372459 NCOA6Q14686 2063 aaPredicted RBP21.97■■□□□ 1.11
CTSA-203ENST00000372459 LOC390937A0A1W2PQ73 354 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 TM4SF5O14894 197 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 APOC1P02654 83 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 CST2P09228 141 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 ZNF20P17024 532 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 BDKRB2P30411 391 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 TAS2R20P59543 309 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 RRAS2P62070 204 aaPredicted RBP21.97■■□□□ 1.11
CTSA-203ENST00000372459 PLA2G7Q13093 441 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 ZFAND1Q8TCF1 268 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 AUNIPQ9H7T9 357 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 PLEKHA1Q9HB21 404 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 GPR84Q9NQS5 396 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 PLSCR3Q9NRY6 295 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 ING3Q9NXR8 418 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 EMC3Q9P0I2 261 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 ZNF319Q9P2F9 582 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 BOLA1Q9Y3E2 137 aa21.97■■□□□ 1.11
CTSA-203ENST00000372459 INMT-MINDY4F8WBC2 141 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 XRCC3O43542 346 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 ACTL6AO96019 429 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 C1QBP02746 253 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 ITGB2P05107 769 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 CCL1P22362 96 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 CCL11P51671 97 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 RAB25P57735 213 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 ZNF813Q6ZN06 617 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 DOK3Q7L591 496 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 OR1M1Q8NGA1 313 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 PGAM5Q96HS1 289 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 FOXB1Q99853 325 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 TMEM138Q9NPI0 162 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 F5H5K5 113 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 MRPL33O75394 65 aaKnown RBP21.96■■□□□ 1.11
CTSA-203ENST00000372459 TMIGD3P0DMS9 266 aaPredicted RBP21.96■■□□□ 1.11
CTSA-203ENST00000372459 GDNFP39905 211 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 GZMKP49863 264 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 FAPQ12884 760 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms