RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SOX8P57073 446 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 CSNK2A1P68400 391 aaPredicted RBP12.46□□□□□ -0.42
LDB3-204ENST00000372066 HIST3H3Q16695 136 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 PRAMEF20Q5VT98 475 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 CD276Q5ZPR3 534 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 Q6ZS92 163 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 DKKL1Q9UK85 242 aa12.46□□□□□ -0.42
LDB3-204ENST00000372066 ALPK2Q86TB3 2170 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 PHF3Q92576 2039 aaKnown RBP12.45□□□□□ -0.42
LDB3-204ENST00000372066 IGKV1D-43A0A0B4J1Z2 117 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 A0A1W2PNR3 127 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 ANKRD20A5PA0PJZ0 165 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 CBR3O75828 277 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 CELA2AP08217 269 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 H2AFB2P0C5Z0 115 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 STOMP27105 288 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 GIFP27352 417 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 CD83Q01151 205 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 AIMP2Q13155 320 aaKnown RBP12.45□□□□□ -0.42
LDB3-204ENST00000372066 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 TMEM176BQ3YBM2 270 aaPredicted RBP12.45□□□□□ -0.42
LDB3-204ENST00000372066 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
LDB3-204ENST00000372066 PRSS45Q7RTY3 260 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 IZUMO1Q8IYV9 350 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 DNAAF1Q8NEP3 725 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 OR2AJ1Q8NGZ0 328 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 OR52I2Q8NH67 350 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 PTX4Q96A99 478 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 PHF21AQ96BD5 680 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 RNF170Q96K19 258 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 EMC6Q9BV81 110 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 MED28Q9H204 178 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 GHITMQ9H3K2 345 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 ZNF160Q9HCG1 818 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 PTTG3PQ9NZH4 202 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 PCSK5Q92824 1860 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 CACNA1CQ13936 2221 aa12.45□□□□□ -0.42
LDB3-204ENST00000372066 A0A1W2PPL8 197 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 WNT11O96014 354 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 CCL3P10147 92 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 SFTPDP35247 375 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 POU3F4P49335 361 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
LDB3-204ENST00000372066 NKX2-5P52952 324 aaPredicted RBP12.44□□□□□ -0.42
LDB3-204ENST00000372066 PSMA6P60900 246 aaKnown RBP12.44□□□□□ -0.42
LDB3-204ENST00000372066 H3F3AP84243 136 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 CDK10Q15131 360 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
LDB3-204ENST00000372066 C1orf100Q5SVJ3 147 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 LRFN4Q6PJG9 635 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 ELMOD2Q8IZ81 293 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 CAPSLQ8WWF8 208 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 FAM3DQ96BQ1 224 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 PIGQQ9BRB3 760 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 PROK2Q9HC23 129 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 HRASLSQ9HDD0 168 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 CENPMQ9NSP4 180 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 FAM206AQ9NX38 181 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 FBXL3Q9UKT7 428 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 CREBBPQ92793 2442 aa12.44□□□□□ -0.42
LDB3-204ENST00000372066 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
LDB3-204ENST00000372066 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 GGT3PA6NGU5 568 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
LDB3-204ENST00000372066 SULT1C2O00338 296 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 CTAG2O75638 210 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 ITGA5P08648 1049 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 CSF1P09603 554 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 S100A1P23297 94 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 HTR2CP28335 458 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 LSM6P62312 80 aaKnown RBP12.43□□□□□ -0.42
LDB3-204ENST00000372066 RAC1P63000 192 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 H3F3CQ6NXT2 135 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 MDGA2Q7Z553 956 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 GPAT4Q86UL3 456 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 OR51D1Q8NGF3 324 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
LDB3-204ENST00000372066 DMRTB1Q96MA1 342 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 FYTTD1Q96QD9 318 aaKnown RBP12.43□□□□□ -0.42
LDB3-204ENST00000372066 TMEM185BQ9H7F4 350 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 EMC7Q9NPA0 242 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 TAS2R4Q9NYW5 299 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 MYO9AB2RTY4 2548 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 TRAV6A0A075B6T7 132 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 A0A0A6YYJ9 748 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 H7C417 338 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 PEX14O75381 377 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 RBBP9O75884 186 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 MT-ND4P03905 459 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 P04436 131 aa12.43□□□□□ -0.42
LDB3-204ENST00000372066 GABRA1P14867 456 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms