RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 A3GALT2U3KPV4 340 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 LOC102725191A0A1B0GVB3 256 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3FA6NER0 549 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 ZIC3O60481 467 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TPST2O60704 377 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 WISP1O95388 367 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 AIFM1O95831 613 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 APOC1P02654 83 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 KLK1P06870 262 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 GLB1P16278 677 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CMPK1P30085 196 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 GNRHRP30968 328 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 LIPAP38571 399 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RGS6P49758 472 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PMPCAQ10713 525 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 KLRB1Q12918 225 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TOMM34Q15785 309 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 HIST2H2ACQ16777 129 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 C2orf68Q2NKX9 166 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RPEL1Q2QD12 228 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 LIPKQ5VXJ0 399 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3GQ6DHY5 549 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ELP2Q6IA86 826 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 DEF8Q6ZN54 512 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 Q6ZS52 159 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC25A48Q6ZT89 311 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 FAM92BQ6ZTR7 304 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC35F3Q8IY50 421 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC37A3Q8NCC5 494 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ZNF740Q8NDX6 193 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CCDC54Q8NEL0 328 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR7A2PQ8NGA2 310 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR4D6Q8NGJ1 314 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR4K15Q8NH41 348 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RASSF5Q8WWW0 418 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RAB39BQ96DA2 213 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 MRI1Q9BV20 369 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR51M1Q9H341 326 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PIGUQ9H490 435 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 GPN2Q9H9Y4 310 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 TIGARQ9NQ88 270 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 INPP5EQ9NRR6 644 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 LSM4Q9Y4Z0 139 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 HS3ST3B1Q9Y662 390 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3DA0A087WVF3 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3IA0A087WXS9 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 IGHV1OR21-1A0A087WYE8 117 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3EA0A087X179 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3LB9A6J9 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 CLIC1O00299 241 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 IMPA2O14732 288 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 EFNA2O43921 213 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 CEACAM4O75871 244 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 IGHA1P01876 353 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3HP0C7X1 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 RD3LP0DJH9 198 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 SAGP10523 405 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 EMDP50402 254 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 DAPP51397 102 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 AQP4P55087 323 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 MTCP1P56278 107 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 RPL38P63173 70 aaKnown RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 SLC35A2P78381 396 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 HMGCS1Q01581 520 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 CD300CQ08708 224 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 INPP5JQ15735 1006 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 PXDC1Q5TGL8 231 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3CQ6IPX1 549 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 MFSD12Q6NUT3 480 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 DRAM2Q6UX65 266 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 CPEB2Q7Z5Q1 589 aaKnown RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 C17orf64Q86WR6 236 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 TRIM48Q8IWZ4 208 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 DND1Q8IYX4 353 aaKnown RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3Q8IZP1 549 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 ACOT4Q8N9L9 421 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 OR4D10Q8NGI6 311 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 OR1F12Q8NHA8 337 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 C16orf52Q8NHV5 167 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 ZNF721Q8TF20 911 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 CANT1Q8WVQ1 401 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 ZNF300Q96RE9 604 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 WDR77Q9BQA1 342 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 TPT1P8Q9HAU6 139 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 FGF20Q9NP95 211 aaPredicted RBP3.4□□□□□ -1.86
MCF2-203ENST00000370576 GPR83Q9NYM4 423 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 KCNE5Q9UJ90 142 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 NUP50Q9UKX7 468 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 OR1A2Q9Y585 309 aa3.4□□□□□ -1.86
MCF2-203ENST00000370576 ELOA3CA0A087WX78 387 aaPredicted RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 A0A1B0GVI7 797 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ELOA3DA6NLF2 546 aaPredicted RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 KPNA3O00505 521 aaPredicted RBP3.4□□□□□ -1.87
MCF2-203ENST00000370576 HSPA12AO43301 675 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 LDB3O75112 727 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 KRT75O95678 551 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 TMEM50AO95807 157 aa3.4□□□□□ -1.87
MCF2-203ENST00000370576 ACP2P11117 423 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms