RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 A0A0B4J2E0 115 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 A0A1B0GX12 115 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 FFAR1O14842 300 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 MEOX2P50222 304 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 BTG2P78543 158 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 TMEM268Q5VZI3 342 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 ZNF687Q8N1G0 1237 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 PRDM7Q9NQW5 492 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 SLC17A5Q9NRA2 495 aa14.42□□□□□ -0.1
COL17A1-202ENST00000369733 SCRG1O75711 98 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 OPRM1P35372 400 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 TM4SF4P48230 202 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 H3F3AP84243 136 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 KCNAB1Q14722 419 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PCK2Q16822 640 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 ZNF793Q6ZN11 406 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 C15orf54Q8N8G6 183 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 ZG16BQ96DA0 208 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 CABLES2Q9BTV7 478 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PRAMEF25A6NGN4 478 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 XRCC2O43543 280 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PTGER4P35408 488 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 LTC4SQ16873 150 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PPP1R3BQ86XI6 285 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 ZDHHC22Q8N966 263 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 HAO2Q9NYQ3 351 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 TMEM272A0A1B0GTI8 110 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 GSTZ1O43708 216 aaPredicted RBP14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PPICP45877 212 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 HOXA1P49639 335 aaPredicted RBP14.41□□□□□ -0.1
COL17A1-202ENST00000369733 RBP2P50120 134 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 CDKN3Q16667 212 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 FAM185AQ8N0U4 392 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 BATF2Q8N1L9 274 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 ZNF808Q8N4W9 903 aaPredicted RBP14.41□□□□□ -0.1
COL17A1-202ENST00000369733 DAZAP1Q96EP5 407 aaKnown RBP14.41□□□□□ -0.1
COL17A1-202ENST00000369733 TXN2Q99757 166 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 NSG1A0A0A6YYJ2 146 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 H0Y8X5 98 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 OR5H8P0DN80 308 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 ADPRHP54922 357 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 NR0B2Q15466 257 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 AMER3Q8N944 861 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 GPX8Q8TED1 209 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PHYHIPLQ96FC7 376 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 PLEKHF2Q9H8W4 249 aa14.41□□□□□ -0.1
COL17A1-202ENST00000369733 CTAG2O75638 210 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 GZMMP51124 257 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 PIGPP57054 158 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 GPR85P60893 370 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 AGBL4Q5VU57 503 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 LRP5LA4QPB2 252 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 IDSB3KWA1 339 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 G3V3Y1 287 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 QDPRP09417 244 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 PPP1R1AQ13522 171 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 ANKRD16Q6P6B7 361 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 FAM199XQ6PEV8 388 aaPredicted RBP14.4□□□□□ -0.1
COL17A1-202ENST00000369733 OR4A16Q8NH70 328 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 OTOSQ8NHW6 89 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 TVP23CQ96ET8 276 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 WDR34Q96EX3 536 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 OR8B4Q96RC9 309 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 TNFRSF10CO14798 259 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 THEM4Q5T1C6 240 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 A0A087WUJ7 227 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 KIR2DS1A0A191URI9 304 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 KIR2DS4P43632 304 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 KIR2DS1Q14954 304 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 GUK1Q16774 197 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 TFAP2EQ6VUC0 442 aa14.4□□□□□ -0.1
COL17A1-202ENST00000369733 CTDSPLO15194 276 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ENPP1P22413 925 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ACKR3P25106 362 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 THBS3P49746 956 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 MIDNQ504T8 468 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 PATE1Q8WXA2 126 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 IL21Q9HBE4 155 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 MED29Q9NX70 200 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 PPIL1Q9Y3C6 166 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 IGHV3-20A0A0C4DH32 117 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ABHD16AO95870 558 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 MGST1P10620 155 aaKnown RBP14.39□□□□□ -0.11
COL17A1-202ENST00000369733 SSTP61278 116 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 OR10J5Q8NHC4 309 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 CHAC2Q8WUX2 184 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 CDC42EP2O14613 210 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 HYAL3O43820 417 aaPredicted RBP14.39□□□□□ -0.11
COL17A1-202ENST00000369733 PDGFBP01127 241 aaPredicted RBP14.39□□□□□ -0.11
COL17A1-202ENST00000369733 GUSBP08236 651 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 WDR38Q5JTN6 314 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 NT5CQ8TCD5 201 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 CCDC74AQ96AQ1 378 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 NOSIPQ9Y314 301 aaKnown RBP14.39□□□□□ -0.11
COL17A1-202ENST00000369733 C20orf202A1L168 122 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 POM121BA6NF01 834 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 RAB27BO00194 218 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 GABRA1P14867 456 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms