RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CMSS1Q9BQ75 279 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 NXF2Q9GZY0 626 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 C20orf85Q9H1P6 137 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 NELFAQ9H3P2 528 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 NARFLQ9H6Q4 476 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF391Q9UJN7 358 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 B3GALT1Q9Y5Z6 326 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZDBF2Q9HCK1 2354 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PLXNA4Q9HCM2 1894 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 TRIM64BA6NI03 449 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PATE3B3GLJ2 98 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 F5H0A9 414 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 XRCC2O43543 280 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PMS2P2O95744 297 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SCGB1D2O95969 90 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PRH1P02810 166 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF35P13682 527 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ATF1P18846 271 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 TBPP20226 339 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CCR6P51684 374 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZP4Q12836 540 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 C2orf76Q3KRA6 126 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZBTB37Q5TC79 503 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DHRS13Q6UX07 377 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PRSS45Q7RTY3 260 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CD163Q86VB7 1156 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 FOXRED2Q8IWF2 684 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CMTM1Q8IZ96 169 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 OR51A2Q8NGJ7 313 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CT55Q8WUE5 264 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PP6455Q8WZ26 134 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SPIN2AQ99865 258 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SPIN2BQ9BPZ2 258 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SF3B5Q9BWJ5 86 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RGCCQ9H4X1 137 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF286AQ9HBT8 521 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RAB9BQ9NP90 201 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 FBXL3Q9UKT7 428 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 UBE2J1Q9Y385 318 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PCDHGA1Q9Y5H4 931 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 C4orf47A7E2U8 309 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 EEF1E1-BLOC1S5C9J1V9 151 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DVL2O14641 736 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 OIP5O43482 229 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DXOO77932 396 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 HLA-AP01891 365 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 GNRHRP30968 328 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RFX2P48378 723 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SRP9P49458 86 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RAC3P60763 192 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 FZD5Q13467 585 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 OR1C1Q15619 314 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 C9orf135Q5VTT2 229 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 C1QL3Q5VWW1 255 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC23A3Q6PIS1 610 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DPPA2Q7Z7J5 298 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SULF2Q8IWU5 870 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ARHGEF39Q8N4T4 335 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 LIPHQ8WWY8 451 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SARAFQ96BY9 339 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 PRRX2Q99811 253 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 EHFQ9NZC4 300 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 MRM2Q9UI43 246 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 IGKV3D-11A0A0A0MRZ8 115 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SHISA8B8ZZ34 492 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 NPIPB9F8W1W9 429 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 KLF4O43474 513 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 FADS1O60427 444 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ATG12O94817 140 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CTSBP07858 339 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RBP2P50120 134 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF121P58317 390 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 GK2Q14410 553 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 OR2M3Q8NG83 312 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 TECTBQ96PL2 329 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 UQCC2Q9BRT2 126 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DNTTIP1Q9H147 329 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 LTBP2Q14767 1821 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 A0A1W2PQM1 296 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ANKRD61A6NGH8 418 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 KRBOX1C9JBD0 128 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 OR7C1O76099 320 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 KNG1P01042 644 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DBHP09172 617 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF17P17021 662 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CNR1P21554 472 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 CD82P27701 267 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 THBS4P35443 961 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 SNU13P55769 128 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RBPJQ06330 500 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 FMODQ06828 376 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 EXOSC2Q13868 293 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 RAB35Q15286 201 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 TRIP6Q15654 476 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 TBC1D28Q2M2D7 210 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 LPCAT3Q6P1A2 487 aa4.76□□□□□ -1.65
SMNDC1-202ENST00000369603 DRAM2Q6UX65 266 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms