RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 SLC17A7Q9P2U7 560 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 UBIAD1Q9Y5Z9 338 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 RFNGQ9Y644 331 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 BRWD3Q6RI45 1802 aa1.94□□□□□ -2.1
ECHDC1-201ENST00000368287 SCN1AP35498 2009 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 COL27A1Q8IZC6 1860 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 C2orf16Q68DN1 1984 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 TRAV40A0A0B4J280 105 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 A0A0J9YXV3 536 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 OR6C74A6NCV1 312 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 SUPT3HB4E1H0 165 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 ZBTB5O15062 677 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 YIF1AO95070 293 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 APCSP02743 223 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 OR56A5P0C7T3 313 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 UBCP0CG48 685 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 PGA4P0DJD7 388 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 PGA3P0DJD8 388 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 PGA5P0DJD9 388 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 SFTPCP11686 197 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 RAB4AP20338 218 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 USF1P22415 310 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 DTYMKP23919 212 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 IL32P24001 234 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 LOXP28300 417 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 RFC3P40938 356 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 VSX2P58304 361 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 QPRTQ15274 297 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 AVPI1Q5T686 147 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC16A13Q7RTY0 426 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 CALHM1Q8IU99 346 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 NKAIN4Q8IVV8 208 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 CDKL3Q8IVW4 592 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF615Q8N8J6 731 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 SNX31Q8N9S9 440 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 LRRC75AQ8NAA5 344 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 OR52P1PQ8NH57 321 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 OR51F2Q8NH61 342 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF461Q8TAF7 563 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 RGP1Q92546 391 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 RPEQ96AT9 228 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF707Q96C28 371 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 NARS2Q96I59 477 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 CAMK2N2Q96S95 79 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 MTG1Q9BT17 334 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 FGF23Q9GZV9 251 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 MRPS30Q9NP92 439 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 DDX18Q9NVP1 670 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 CLN6Q9NWW5 311 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 TMEM14AQ9Y6G1 99 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 PALLDQ8WX93 1383 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 PLA2R1Q13018 1463 aa1.93□□□□□ -2.1
ECHDC1-201ENST00000368287 MROH7Q68CQ1 1323 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 BRCA1P38398 1863 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 YEATS2Q9ULM3 1422 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 TSPAN11A1L157 253 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 C7orf66A4D0T2 115 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 NCF1BA6NI72 391 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 NCF1CA8MVU1 366 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 H0YJW9 148 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 GOLGA8TH3BQL2 631 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 K7EM74 188 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 M0R3G1 203 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CASQ2O14958 399 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 REM1O75628 298 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 SCELO95171 688 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 HLA-HP01893 362 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CD37P11049 281 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CD70P32970 193 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 GFERP55789 205 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 SYNJ2BPP57105 145 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 RPL23P62829 140 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CDK5Q00535 292 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CDC20Q12834 499 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 IL18Q14116 193 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 KIR2DS1Q14954 304 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 LY6EQ16553 131 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC25A34Q6PIV7 304 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 FAM122BQ7Z309 247 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 CBR4Q8N4T8 237 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 C8orf31Q8N9H6 132 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 RNF157Q96PX1 679 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 RNF5Q99942 180 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 RTBDNQ9BSG5 229 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 SLIRPQ9GZT3 109 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC39A1Q9NY26 324 aa1.92□□□□□ -2.1
ECHDC1-201ENST00000368287 GPR179Q6PRD1 2367 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGKV1D-17A0A075B6S4 117 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGKV1-27A0A075B6S5 117 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGHV1OR15-9A0A0B4J2B8 117 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 LRRIQ4A6NIV6 560 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 GABRR3A8MPY1 467 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 KRBOX1C9JBD0 128 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 NDUFC2-KCTD14E9PQ53 114 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 BPY2O14599 106 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 RCBTB2O95199 551 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 MPZL1O95297 269 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGKV1-17P01599 117 aa1.91□□□□□ -2.1
ECHDC1-201ENST00000368287 IGLV3-19P01714 112 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms