RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ERI1Q8IV48 349 aaKnown RBP20.28■□□□□ 0.84
PFDN2-201ENST00000368010 OR8G5Q8NG78 346 aa20.28■□□□□ 0.84
PFDN2-201ENST00000368010 OR6N2Q8NGY6 317 aa20.28■□□□□ 0.84
PFDN2-201ENST00000368010 RAB1CQ92928 201 aa20.28■□□□□ 0.84
PFDN2-201ENST00000368010 TREM2Q9NZC2 230 aa20.28■□□□□ 0.84
PFDN2-201ENST00000368010 WIPI2Q9Y4P8 454 aa20.28■□□□□ 0.84
PFDN2-201ENST00000368010 IQCF6A8MYZ5 107 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 ZNF878C9JN71 531 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 FCGR1AP12314 374 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 IGFBP5P24593 272 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 OTX1P32242 354 aaPredicted RBP20.27■□□□□ 0.84
PFDN2-201ENST00000368010 SPRNQ5BIV9 151 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 DRAM2Q6UX65 266 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 PRIMA1Q86XR5 153 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 PARP8Q8N3A8 854 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 ST7LQ8TDW4 575 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 KCNJ15Q99712 375 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 BEX2Q9BXY8 128 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 SHARPINQ9H0F6 387 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 IL19Q9UHD0 177 aa20.27■□□□□ 0.84
PFDN2-201ENST00000368010 B4DSR2 109 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 G3V2T6 193 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 PRODHO43272 600 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 DAPP51397 102 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 CRISP1P54107 249 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 EIF2B1Q14232 305 aaKnown RBP20.26■□□□□ 0.83
PFDN2-201ENST00000368010 GK2Q14410 553 aaPredicted RBP20.26■□□□□ 0.83
PFDN2-201ENST00000368010 KLHL12Q53G59 568 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 TMEM236Q5W0B7 351 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 CCDC121Q6ZUS5 278 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 ASRGL1Q7L266 308 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 MRPL21Q7Z2W9 205 aaKnown RBP20.26■□□□□ 0.83
PFDN2-201ENST00000368010 DPY19L4Q7Z388 723 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 BHLHE23Q8NDY6 225 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 OR13G1Q8NGZ3 307 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 MARCH7Q9H992 704 aa20.26■□□□□ 0.83
PFDN2-201ENST00000368010 SLC15A1P46059 708 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 PRKXP51817 358 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 PGAP1Q75T13 922 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 SPATC1Q76KD6 591 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 SHFQ7M4L6 423 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 PEG10Q86TG7 708 aaKnown RBP20.25■□□□□ 0.83
PFDN2-201ENST00000368010 ZDHHC13Q8IUH4 622 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 CPOQ8IVL8 374 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 TIGD4Q8IY51 512 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 ITLN1Q8WWA0 313 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 ZMYND19Q96E35 227 aaPredicted RBP20.25■□□□□ 0.83
PFDN2-201ENST00000368010 OR2V2Q96R30 315 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 SLC30A2Q9BRI3 323 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 JMJD1CQ15652 2540 aa20.25■□□□□ 0.83
PFDN2-201ENST00000368010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.24■□□□□ 0.83
PFDN2-201ENST00000368010 HNF1AP20823 631 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 PRSS12P56730 875 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 LMO4P61968 165 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 GRB2P62993 217 aaKnown RBP20.24■□□□□ 0.83
PFDN2-201ENST00000368010 SNAPC1Q16533 368 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 SNAI3Q3KNW1 292 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 CXXC5Q7LFL8 322 aaKnown RBP20.24■□□□□ 0.83
PFDN2-201ENST00000368010 AMIGO2Q86SJ2 522 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 ZNF283Q8N7M2 679 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 OR10AD1Q8NGE0 317 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 RAB39BQ96DA2 213 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 ABHD6Q9BV23 337 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 PRRG3Q9BZD7 231 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 TOR3AQ9H497 397 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 KRT84Q9NSB2 600 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 TMEM106BQ9NUM4 274 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 TVP23BQ9NYZ1 205 aa20.24■□□□□ 0.83
PFDN2-201ENST00000368010 FAM157AC9JC47 383 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 FAM157CP0CG43 387 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 HSD11B1P28845 292 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 DVL1P1P54792 670 aaPredicted RBP20.23■□□□□ 0.83
PFDN2-201ENST00000368010 RPS7P62081 194 aaKnown RBP20.23■□□□□ 0.83
PFDN2-201ENST00000368010 ESRRGP62508 458 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 SLC35D3Q5M8T2 416 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 FAM120AOSQ5T036 256 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 MALRD1Q5VYJ5 2156 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 RNF133Q8WVZ7 376 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 SPRYD4Q8WW59 207 aaPredicted RBP20.23■□□□□ 0.83
PFDN2-201ENST00000368010 LRTOMTQ8WZ04 291 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 GABARAPL1Q9H0R8 117 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 ZNF665Q9H7R5 613 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 TMEM100Q9NV29 134 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 PPP1R3CQ9UQK1 317 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 ABCA2Q9BZC7 2435 aa20.23■□□□□ 0.83
PFDN2-201ENST00000368010 ISPDA4D126 451 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 SLC2A1P11166 492 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 SRP9P49458 86 aaKnown RBP20.22■□□□□ 0.83
PFDN2-201ENST00000368010 PTGES3Q15185 160 aaKnown RBP20.22■□□□□ 0.83
PFDN2-201ENST00000368010 CR1LQ2VPA4 569 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 GLCCI1Q86VQ1 547 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 MEGF10Q96KG7 1140 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 GAL3ST1Q99999 423 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 LPAR2Q9HBW0 351 aa20.22■□□□□ 0.83
PFDN2-201ENST00000368010 MLNRO43193 412 aa20.21■□□□□ 0.83
PFDN2-201ENST00000368010 SELENOFO60613 162 aa20.21■□□□□ 0.83
PFDN2-201ENST00000368010 IFNA2P01563 188 aa20.21■□□□□ 0.83
PFDN2-201ENST00000368010 APOC1P02654 83 aa20.21■□□□□ 0.83
PFDN2-201ENST00000368010 MSMBP08118 114 aa20.21■□□□□ 0.83
PFDN2-201ENST00000368010 PCMT1P22061 227 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms