RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 IL20Q9NYY1 176 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 FITM1A5D6W6 292 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 TUBAL3A6NHL2 446 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 TATDN3Q17R31 274 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 RDH10Q8IZV5 341 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 SHARPINQ9H0F6 387 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 GLTPQ9NZD2 209 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 GDF2Q9UK05 429 aaPredicted RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ADAMTSL1Q8N6G6 1762 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 A0A1W2PPV9 198 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF705EA8MWA4 302 aaPredicted RBP10.43□□□□□ -0.74
SYNE1-204ENST00000367248 GPX5O75715 221 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 GLI4P10075 376 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 AKR1C1Q04828 323 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 SHEQ5VZ18 495 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 PBDC1Q9BVG4 233 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 KIAA1456Q9P272 454 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 SIGLEC7Q9Y286 467 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 R4GMQ9 66 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 TPBGQ13641 420 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 NOXO1Q8NFA2 376 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 FBXO7Q9Y3I1 522 aa10.43□□□□□ -0.74
SYNE1-204ENST00000367248 OR5H15A6NDH6 313 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 OR6C6A6NF89 314 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 NKX2-5P52952 324 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ELFN2Q5R3F8 820 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 FBXW5Q969U6 566 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ZCCHC4Q9H5U6 513 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ESRP2Q9H6T0 727 aaKnown RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 NDUFB11Q9NX14 153 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF391Q9UJN7 358 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SRD5A2P31213 254 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 C21orf58P58505 322 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 RHEBQ15382 184 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 TOMM34Q15785 309 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM100Q9NV29 134 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 NFYAP23511 347 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF141Q15928 474 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 CBLN3Q6UW01 205 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SHROOM3Q8TF72 1996 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 TSPAN15O95858 294 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 UBE3DQ7Z6J8 389 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 PBOV1Q9GZY1 135 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 CACNA1CQ13936 2221 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 HPP00738 406 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 TMPRSS3P57727 454 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SRPXP78539 464 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 HAS2Q92819 552 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SIRT3Q9NTG7 399 aaPredicted RBP10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SLC22A23A1A5C7 686 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF205O95201 554 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 STARD6P59095 220 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 OR51H1Q8NH63 302 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 SMIM19Q96E16 107 aa10.42□□□□□ -0.74
SYNE1-204ENST00000367248 M0QYG6 137 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 RAC1P63000 192 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 PMP22Q01453 160 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 SIAH3Q8IW03 269 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 UBALD1Q8TB05 177 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 UGT2A1Q9Y4X1 527 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 C21orf140B9A014 251 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 CCR9P51686 369 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 RTP5Q14D33 572 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 SLC25A31Q9H0C2 315 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 PRELID3BQ9Y3B1 194 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 SLCO1B1Q9Y6L6 691 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 NRASP01111 189 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 PATE4P0C8F1 98 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 HAAOP46952 286 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 GP2P55259 537 aaKnown RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 PRSS12P56730 875 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 GSG1Q2KHT4 349 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 RNLSQ5VYX0 342 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 OR10D3Q8NH80 312 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 TCTEX1D2Q8WW35 142 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 ANKRD9Q96BM1 317 aaPredicted RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 RASL10BQ96S79 203 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 TSNAXQ99598 290 aaKnown RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 SLCO1C1Q9NYB5 712 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 CHST2Q9Y4C5 530 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 CRYM-AS1A6NIL9 109 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 COX6B1P14854 86 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 RAP2BP61225 183 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 AQP6Q13520 282 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 ATP1A1-AS1Q5TC04 95 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 LSRQ86X29 649 aaPredicted RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 OIT3Q8WWZ8 545 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 ZC3H10Q96K80 434 aaKnown RBP10.41□□□□□ -0.74
SYNE1-204ENST00000367248 NUDT19A8MXV4 375 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 SPDEFO95238 335 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 OR2G2Q8NGZ5 317 aa10.41□□□□□ -0.74
SYNE1-204ENST00000367248 DVL3Q92997 716 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms