RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CGGBP1Q9UFW8 167 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 A0A0B4J2A0 478 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM200CA6NKL6 621 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 C21orf140B9A014 251 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 IGLV3-27P01718 113 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 MRPL19P49406 292 aaKnown RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 EGR3Q06889 387 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SPCS2Q15005 226 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 STUMQ69YW2 141 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 LINC01599Q8WXQ3 324 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 TEAD3Q99594 435 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SLC26A1Q9H2B4 701 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SLA2Q9H6Q3 261 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SHPKQ9UHJ6 478 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 AMDHD2Q9Y303 409 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 PPIL1Q9Y3C6 166 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 IGHV1OR21-1A0A087WYE8 117 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 IGHV1OR15-9A0A0B4J2B8 117 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 CHEK1O14757 476 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 IGFBP1P08833 259 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 CCR2P41597 374 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 AQP6Q13520 282 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 LYPD4Q6UWN0 246 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SLC25A26Q70HW3 274 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 NUFIP2Q7Z417 695 aaKnown RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 GIMAP1Q8WWP7 306 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 UBTD1Q9HAC8 227 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 MED29Q9NX70 200 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 CITO14578 2027 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 MYO10Q9HD67 2058 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 Q56UQ5 140 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 CHRDL1Q9BU40 450 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 ADAT1Q9BUB4 502 aaKnown RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF391Q9UJN7 358 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 CALCBP10092 127 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TNFAIP6P98066 277 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 BEX5Q5H9J7 111 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 BAGE3Q86Y29 109 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 BAGE2Q86Y30 109 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SFTPA2Q8IWL1 248 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SFTPA1Q8IWL2 248 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 CCL17Q92583 94 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TAS2R4Q9NYW5 299 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 PURGQ9UJV8 347 aaKnown RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 STRAPQ9Y3F4 350 aaKnown RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 KCNMB2Q9Y691 235 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 RAB19A4D1S5 217 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SPI1P17947 270 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 DAPP51397 102 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TFF2Q03403 129 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TRAT1Q6PIZ9 186 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 ANKRD53Q8N9V6 530 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 OR13C8Q8NGS7 320 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 CYSLTR2Q9NS75 346 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 GOLT1BQ9Y3E0 138 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TRDV1A0A1B0GX56 115 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 FADS1O60427 444 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 ATP1B1P05026 303 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 MMP11P24347 488 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 DIO1P49895 249 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 GNG3P63215 75 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 DHODHQ02127 395 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 ACSM5Q6NUN0 579 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 NKAIN4Q8IVV8 208 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 OR5D13Q8NGL4 314 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 FCRL1Q96LA6 429 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SEC22CQ9BRL7 303 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 NIPSNAP3BQ9BS92 247 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 EXOSC3Q9NQT5 275 aaKnown RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 PSORS1C1Q9UIG5 152 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 M0QYG6 137 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TMPRSS11DO60235 418 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SPP1P10451 314 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 PPP3CBP16298 524 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 OR5I1Q13606 314 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 CORO6Q6QEF8 472 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 NPEPL1Q8NDH3 523 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 SEC22AQ96IW7 307 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 MRGPRX3Q96LB0 322 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 ALKBH3Q96Q83 286 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 GMPR2Q9P2T1 348 aaKnown RBP9.91□□□□□ -0.82
CLIP1-203ENST00000361654 OSGIN2Q9Y236 505 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 R4GMQ9 66 aa9.91□□□□□ -0.82
CLIP1-203ENST00000361654 TUBAL3A6NHL2 446 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 COX7A2P2O60397 106 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 NXPH3O95157 252 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 HPP00738 406 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 MT-ND4LP03901 98 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 ALPLP05186 524 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-203ENST00000361654 OR2B11Q5JQS5 317 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 NOXO1Q8NFA2 376 aa9.9□□□□□ -0.82
CLIP1-203ENST00000361654 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms