RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SPRY3O43610 288 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 SULT1C4O75897 302 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 PRR35P0CG20 571 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 CPEP16870 476 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 ELK1P19419 428 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 HTD2P86397 168 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 SPINK14Q6IE38 97 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 OR10K2Q6IF99 312 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 SUMF2Q8NBJ7 301 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 HPSE2Q8WWQ2 592 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 TINAGL1Q9GZM7 467 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-202ENST00000361545 RIMS4Q9H426 269 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-202ENST00000361545 GPATCH2Q9NW75 528 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 PPP1R3CQ9UQK1 317 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 EML2O95834 649 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 ETV6P41212 452 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 HNRNPFP52597 415 aaKnown RBP16.75■□□□□ 0.27
CLIP2-202ENST00000361545 DAZAP1Q96EP5 407 aaKnown RBP16.75■□□□□ 0.27
CLIP2-202ENST00000361545 GABARAPH6UMI1 98 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 LINC01387J3KSC0 135 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 ABCD4O14678 606 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 CT62P0C5K7 136 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 SEC22CQ9BRL7 303 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 CDCA4Q9BXL8 241 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 COPS3Q9UNS2 423 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
CLIP2-202ENST00000361545 C17orf112F2Z3M2 114 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 FADS1O60427 444 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 WNT3P56703 355 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 RPL11P62913 178 aaKnown RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 FAHD1Q6P587 224 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 SMIM19Q96E16 107 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 C20orf85Q9H1P6 137 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 A0A0B4J2E0 115 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 A0A1B0GX12 115 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 SULT1B1O43704 296 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 HYAL3O43820 417 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 FAHP16930 419 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 CCR9P51686 369 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 CDK5R1Q15078 307 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 GSG1Q2KHT4 349 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 H2BFWTQ7Z2G1 175 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 JAM3Q9BX67 310 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 A0A0B4J203 849 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 A0A1W2PQF6 199 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 ASPDHA6ND91 283 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 JUNBP17275 347 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 ZNF83P51522 516 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 NKX6-1P78426 367 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-202ENST00000361545 LGI3Q8N145 548 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 ZNF321PQ8N8H1 164 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 OR52I2Q8NH67 350 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 CA5BP1Q8WTZ4 195 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 APC2O95996 2303 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 OR10A3P58181 314 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 FMODQ06828 376 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 MESP2Q0VG99 397 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 CARFQ8N187 725 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 POFUT1Q9H488 388 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 NDUFB11Q9NX14 153 aa16.74■□□□□ 0.27
CLIP2-202ENST00000361545 TEX51A0A1B0GUA7 166 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 ARRDC5A6NEK1 342 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 S100A7P31151 101 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 SERPINF1P36955 418 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 PLAC1Q9HBJ0 212 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 ALG1L2C9J202 215 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 SIX6O95475 246 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 GP2P55259 537 aaKnown RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 PRAMEF5Q5TYX0 476 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 PRAMEF6Q5VXH4 476 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 OR8G2PQ6IF36 304 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 ZNF2Q9BSG1 426 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 PCBP4P57723 403 aaKnown RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 CELF2-AS1Q8N7Q2 184 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 SLC38A9Q8NBW4 561 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 WDR34Q96EX3 536 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 TCFL5Q9UL49 500 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 KCNJ8Q15842 424 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 ALKAL2Q6UX46 152 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 CXorf67Q86X51 503 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 OR2G2Q8NGZ5 317 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 FCRL1Q96LA6 429 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 TECTBQ96PL2 329 aa16.73■□□□□ 0.27
CLIP2-202ENST00000361545 TRIP12Q14669 1992 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 TPRP12270 2363 aaKnown RBP16.73■□□□□ 0.27
CLIP2-202ENST00000361545 GNB3P16520 340 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 CHATP28329 748 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 TMPRSS7Q7RTY8 843 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 DUSP15Q9H1R2 295 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-202ENST00000361545 C20orf141Q9NUB4 165 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 DNAJB12Q9NXW2 375 aaKnown RBP16.72■□□□□ 0.27
CLIP2-202ENST00000361545 TOX3O15405 576 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-202ENST00000361545 GPR12P47775 334 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 NLRC3Q7RTR2 1065 aa16.72■□□□□ 0.27
CLIP2-202ENST00000361545 NUDCD2Q8WVJ2 157 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms