RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 MRPL41Q8IXM3 137 aaKnown RBP4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 GCSAMQ8N6F7 178 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 OR51D1Q8NGF3 324 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.79□□□□□ -1.642e-12■■■■■ 54.4
CDC42SE2-201ENST00000360515 DPF1Q92782 380 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 TEX37Q96LM6 180 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 MSL2Q9HCI7 577 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 UBAP1Q9NZ09 502 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 ZNF222Q9UK12 451 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 STARD10Q9Y365 291 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 MINOS1-NBL1R4GNA1 71 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 BIRC5O15392 142 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 SYNGR1O43759 233 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 CYP7B1O75881 506 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 CYB5R3P00387 301 aaPredicted RBP4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 GPX2P18283 190 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 CAPZA2P47755 286 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 CDH12P55289 794 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 ECH1Q13011 328 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 RGNQ15493 299 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 C10orf107Q8IVU9 208 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 KDM8Q8N371 416 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 CYB561A3Q8NBI2 242 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 DYDC1Q8WWB3 177 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 RAB3IPQ96QF0 476 aaPredicted RBP4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 EMC6Q9BV81 110 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 VNN3Q9NY84 501 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
CDC42SE2-201ENST00000360515 NR2F1P10589 423 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 ETFAP13804 333 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CD247P20963 164 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 IL12AP29459 219 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CDKN2CP42773 168 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 AQP5P55064 265 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 DBPQ10586 325 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RIPK1Q13546 671 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 NFYCQ13952 458 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PCK2Q16822 640 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SLC15A3Q8IY34 581 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 TMEM106AQ96A25 262 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SDSLQ96GA7 329 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 HDHD2Q9H0R4 259 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RNF121Q9H920 327 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SF3B6Q9Y3B4 125 aaKnown RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 N6AMT1Q9Y5N5 214 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 DNAH11Q96DT5 4516 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 IGKV1D-43A0A0B4J1Z2 117 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 DVL1O14640 695 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 IMPA2O14732 288 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 DNAJC8O75937 253 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PATE4P0C8F1 98 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RPL4P36578 427 aaKnown RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 UAP1Q16222 522 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CFAP157Q5JU67 520 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 ZCCHC23Q6ZST2 131 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 FAM122BQ7Z309 247 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 ARMC8Q8IUR7 673 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 FNDC5Q8NAU1 212 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SCCPDHQ8NBX0 429 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CDC26Q8NHZ8 85 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 APOPT1Q96IL0 206 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CLPTM1LQ96KA5 538 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 TRIM31Q9BZY9 425 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 TMEM27Q9HBJ8 222 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 INIPQ9NRY2 104 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RABL2AQ9UBK7 228 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SCOCQ9UIL1 159 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 TMCC3Q9ULS5 477 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 C1QCP02747 245 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 IFNW1P05000 195 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PGA5P0DJD9 388 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SOAT1P35610 550 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 GLIPR1P48060 266 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 SLC9A3P48764 834 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CLRN1P58418 232 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 NANOGNBQ7Z5D8 188 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RANBP3LQ86VV4 465 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PPA2Q9H2U2 334 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 AKTIPQ9H8T0 292 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 MEPEQ9NQ76 525 aaPredicted RBP4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 RASL12Q9NYN1 266 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 CORO2BQ9UQ03 480 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 PKD1P98161 4303 aa4.78□□□□□ -1.64
CDC42SE2-201ENST00000360515 A0A1W2PRG6 482 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A18PA6NE21 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A16PA6NEW6 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A20PA6NIJ5 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A9PA6NNJ1 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A12PA8MX19 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 FAM90A5PA8MXJ8 464 aa4.77□□□□□ -1.65
CDC42SE2-201ENST00000360515 CCRL2O00421 344 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms