RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SSC4DQ8WTU2 575 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 NANOS1Q8WY41 292 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 AP3S1Q92572 193 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 NXF2Q9GZY0 626 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 PBOV1Q9GZY1 135 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 SLITRK2Q9H156 845 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 TPK1Q9H3S4 243 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 RNF121Q9H920 327 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 BRD7Q9NPI1 651 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 CRNNQ9UBG3 495 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 HHLA2Q9UM44 414 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 PMF1-BGLAPU3KQ54 211 aa12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 PRRC2CQ9Y520 2896 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 INTS1Q8N201 2190 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-203ENST00000359265 A0A075B6Q4 140 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 IQCMA0A1B0GVH7 501 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 LOC107986453A0A1B0GWG9 222 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC19A2O60779 497 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 IL2RAP01589 272 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 TTRP02766 147 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 CD2P06729 351 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ANXA2P07355 339 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ITGA5P08648 1049 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 TMIGD3P0DMS9 266 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 CFL1P23528 166 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 PAX7P23759 505 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 OTX1P32242 354 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 S100A5P33763 92 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 TIMP3P35625 211 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 PEX19P40855 299 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 KIR2DL2P43627 348 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 HTR5AP47898 357 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 SOX2P48431 317 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 TGFBR3Q03167 851 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF774Q6NX45 483 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ST6GALNAC3Q8NDV1 305 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 PPIL3Q9H2H8 161 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 SMURF1Q9HCE7 757 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 DHDHQ9UQ10 334 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM215AQ9Y5M1 114 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 DNHD1Q96M86 4753 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 ZGRF1Q86YA3 2104 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 NF1P21359 2839 aa12.1□□□□□ -0.47
PDLIM5-203ENST00000359265 A0A096LPE4 126 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 A0A1B0GVI7 797 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 SHISA3A0PJX4 238 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 OR6C6A6NF89 314 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 WIPF3A6NGB9 483 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 M0R135 149 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 PDCD5O14737 125 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 UBL3O95164 117 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 IL18BPO95998 194 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 RAF1P04049 648 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 RAB3BP20337 219 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 CRYGSP22914 178 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 ARR3P36575 388 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC6A9P48067 706 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 CASP6P55212 293 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 TPTEP56180 551 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 PSG4Q00888 419 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 GALK2Q01415 458 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 DRAM2Q6UX65 266 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 Q6ZT83 130 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 SEM1Q6ZVN7 128 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 LUZP2Q86TE4 346 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 RDH10Q8IZV5 341 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 OR6Q1Q8NGQ2 317 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 OR10AC1Q8NH08 325 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 ZNF799Q96GE5 643 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 BARHL1Q9BZE3 327 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 SP140LQ9H930 580 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 TCF7L1Q9HCS4 588 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 PEX16Q9Y5Y5 336 aa12.09□□□□□ -0.47
PDLIM5-203ENST00000359265 ADGRG4Q8IZF6 3080 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 A0A1W2PPK0 400 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 SMIM30A4D0T7 59 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 F5H5K5 113 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 P2RY10O00398 339 aa12.08□□□□□ -0.48
PDLIM5-203ENST00000359265 PIN1P1O15428 100 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms