RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SCPEP1Q9HB40 452 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 CUTCQ9NTM9 273 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 CYB5R1Q9UHQ9 305 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 TNFSF18Q9UNG2 199 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 AUP1Q9Y679 476 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 LOC101059948A0A1B0GTJ6 334 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PP11 408 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF850A8MQ14 1090 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 NME2P1O60361 137 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 CSTBP04080 98 aaKnown RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SPP1P10451 314 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 IL11P20809 199 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 BLVRBP30043 206 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 GPR3P46089 330 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 NPBWR1P48145 328 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 CAMLGP49069 296 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 OR2B8PP59922 312 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 EGR4Q05215 589 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 MPPED2Q15777 294 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 IAH1Q2TAA2 248 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 LDLRAD3Q86YD5 345 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SLC22A24Q8N4F4 322 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 MFSD8Q8NHS3 518 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM234Q8WY98 164 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 CTHRC1Q96CG8 243 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF426Q9BUY5 554 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 NMNAT2Q9BZQ4 307 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ZCCHC4Q9H5U6 513 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 EXOSC3Q9NQT5 275 aaKnown RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 A8MVM7 634 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 FOXS1O43638 330 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 OR2T1O43869 369 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ITGB2P05107 769 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM225BP0DP42 221 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 PPICP45877 212 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ID4P47928 161 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 RAB13P51153 203 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 POLR2HP52434 150 aaKnown RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 HSD17B7P56937 341 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 INSM1Q01101 510 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SKP2Q13309 424 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 RAB32Q13637 225 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 FHL1Q13642 323 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 LY6G6FQ5SQ64 297 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 HSD17B11Q8NBQ5 300 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 OR1M1Q8NGA1 313 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 OR2I1PQ8NGU4 316 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 NEK7Q8TDX7 302 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 PIGTQ969N2 578 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SLAMF9Q96A28 289 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 ISOC2Q96AB3 205 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SLAMF6Q96DU3 332 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 AKR1E2Q96JD6 320 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SLC46A1Q96NT5 459 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 OR5B2Q96R09 309 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 RHOFQ9HBH0 211 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 TAF9BQ9HBM6 251 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 SDHAF3Q9NRP4 125 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 PARPBPQ9NWS1 579 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 R4GMQ9 66 aa5.89□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PPC1 479 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 VSTM2BA6NLU5 285 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PRAMEF26H0Y7S4 382 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TNFSF14O43557 240 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SSX5O60225 188 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF354AO60765 605 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 NSA2O95478 260 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 CRYBA1P05813 215 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 GLRA1P23415 457 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ELAVL1Q15717 326 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 EMC4Q5J8M3 183 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM92Q6UXU6 159 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RTL10Q7L3V2 364 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 LRRC18Q8N456 261 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 OR51F2Q8NH61 342 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RNASE11Q8TAA1 199 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ARL5BQ96KC2 179 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 CHRDQ9H2X0 955 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TXNIPQ9H3M7 391 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ZFP57Q9NU63 452 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 DZANK1Q9NVP4 752 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SUSD2Q9UGT4 822 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 NDRG3Q9UGV2 375 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PURGQ9UJV8 347 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PHF3Q92576 2039 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 IGHV5-51A0A0C4DH38 117 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PNR3 127 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 FAM221AA4D161 298 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 K7EPK0 472 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SOCS1O15524 211 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ASAH2BP0C7U1 165 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PET100P0DJ07 73 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RCC1P18754 421 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 OMGP23515 440 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 MST1P26927 711 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 KIR2DL1P43626 348 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RGS19P49795 217 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms