RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DCTDP32321 178 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 PSMA6P60900 246 aaKnown RBP12.81□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF787Q6DD87 383 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 VHLLQ6RSH7 139 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 RORBQ92753 470 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CCNE1-202ENST00000357943 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 CA10Q9NS85 328 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 TBCCD1Q9NVR7 557 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 ATP23Q9Y6H3 246 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 ROS1P08922 2347 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 E7EQL1 145 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 GOSR1O95249 250 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MT-ND2P03891 347 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 PSMB10P40306 273 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 RAD52P43351 418 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CDH15P55291 814 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 GABARAPL2P60520 117 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MFGE8Q08431 387 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF672Q499Z4 452 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 SPATA46Q5T0L3 261 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 ARL9Q6T311 187 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 FAM57BQ71RH2 274 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 PRSS48Q7RTY5 328 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 FAM220AQ7Z4H9 259 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 KLHL36Q8N4N3 616 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 NUP37Q8NFH4 326 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 OR1J1Q8NGS3 322 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 SPRYD4Q8WW59 207 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MRPL48Q96GC5 212 aaKnown RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CLEC4MQ9H2X3 399 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 FAM206AQ9NX38 181 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 STARD10Q9Y365 291 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 SPEF1Q9Y4P9 236 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 TACC2O95359 2948 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 A0A087WXM4 84 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 APOC1P02654 83 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 LCKP06239 509 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 TACSTD2P09758 323 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 THBS4P35443 961 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 GLRXP35754 106 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 RGS6P49758 472 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MMP16P51512 607 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 TLE4Q04727 773 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 DOC2BQ14184 412 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 IRF3Q14653 427 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 RNLSQ5VYX0 342 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 NANOGP1Q8N7R0 232 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF485Q8NCK3 441 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 TMEM171Q8WVE6 324 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 GATAD2BQ8WXI9 593 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 APOBEC3DQ96AK3 386 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 C14orf79Q96F83 325 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 BCL2L14Q9BZR8 327 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 OR2J1Q9GZK6 312 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
CCNE1-202ENST00000357943 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 R4GMQ9 66 aa12.8□□□□□ -0.36
CCNE1-202ENST00000357943 CSMD1Q96PZ7 3565 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 TMEM129A0AVI4 362 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 E9PI62 339 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 MYL12BO14950 172 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 CLPTM1O96005 669 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 TFAP2AP05549 437 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 ATP6V1B1P15313 513 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 PPP1CBP62140 327 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF829Q3KNS6 432 aaPredicted RBP12.79□□□□□ -0.36
CCNE1-202ENST00000357943 XAF1Q6GPH4 301 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 UNQ6126/PRO20091Q6UXV3 157 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 OR2AE1Q8NHA4 323 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 SLC25A40Q8TBP6 338 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 G6PC2Q9NQR9 355 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 GTF2A1LQ9UNN4 478 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 CENPEQ02224 2701 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
CCNE1-202ENST00000357943 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 A6NHS1 94 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 LOC110117498-PIK3R3F6TDL0 507 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 J3QW42 95 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 TBX1O43435 398 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 LALBAP00709 142 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 MT-ND5P03915 603 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PRF1P14222 555 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 MAP2K4P45985 399 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms