RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CIB3Q96Q77 187 aaPredicted RBP10.65□□□□□ -0.71
COL9A1-202ENST00000357250 PBOV1Q9GZY1 135 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 BANF2Q9H503 90 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 RNF167Q9H6Y7 350 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 PRDM7Q9NQW5 492 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 DLL4Q9NR61 685 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 DECR2Q9NUI1 292 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 CYB5R1Q9UHQ9 305 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 FLVCR1Q9Y5Y0 555 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 TET1Q8NFU7 2136 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CCDC163A0A0D9SF12 145 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF705GA8MUZ8 300 aaPredicted RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 DHHO43323 396 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 NRASP01111 189 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 SLC2A1P11166 492 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 DTYMKP23919 212 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CTF1Q16619 201 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 DEGS2Q6QHC5 323 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 KIRREL2Q6UWL6 708 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 FYTTD1Q96QD9 318 aaKnown RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 GPR173Q9NS66 373 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CYSLTR2Q9NS75 346 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 LIN7CQ9NUP9 197 aaKnown RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 DUSP13Q9UII6 198 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 APC2O95996 2303 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 METTL12A8MUP2 240 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 C1QAP02745 245 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 MGMTP16455 207 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 THBS4P35443 961 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 OR8G1Q15617 311 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TMEM215Q68D42 235 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 LAIR1Q6GTX8 287 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 H3F3CQ6NXT2 135 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF683Q8IZ20 524 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TMEM229BQ8NBD8 167 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF2Q9BSG1 426 aaPredicted RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CHST6Q9GZX3 395 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ERVMER34-1Q9H9K5 563 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 C12orf10Q9HB07 376 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TMEM235A6NFC5 223 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 OR5H14A6NHG9 310 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TNFSF12O43508 249 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 SIX6O95475 246 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ADH4P08319 380 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 POU2F2P09086 479 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 MAGEB1P43366 347 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 UBE2MP61081 183 aaKnown RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 BTG2P78543 158 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 SOWAHCQ53LP3 525 aaPredicted RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 VWA2Q5GFL6 755 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 LILRA6Q6PI73 481 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TSLPQ969D9 159 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 TUBG2Q9NRH3 451 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 SIRT5Q9NXA8 310 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CTSFQ9UBX1 484 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CSAG2Q9Y5P2 127 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 IGHV3-20A0A0C4DH32 117 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ANKRD34BA5PLL1 514 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 PPP1R2P9O14990 202 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 RAB1AP62820 205 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 CDK5Q00535 292 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 AQP6Q13520 282 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 FAM199XQ6PEV8 388 aaPredicted RBP10.64□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF485Q8NCK3 441 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 C2orf50Q96LR7 162 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 OR8B4Q96RC9 309 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 RNF32Q9H0A6 362 aa10.64□□□□□ -0.71
COL9A1-202ENST00000357250 KCNE1BA0A087WTH5 132 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 A0A0A6YYJ9 748 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 HSPB6O14558 160 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 EIF4EP06730 217 aaKnown RBP10.63□□□□□ -0.71
COL9A1-202ENST00000357250 ZGLP1P0C6A0 271 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 EDDM3BP56851 147 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 OR8B8Q15620 311 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 ANKRD34AQ69YU3 496 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 LYG2Q86SG7 212 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 MENTQ9BUN1 341 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 A0A0B4J2E0 115 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 A0A1B0GX12 115 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 ZC3H12DA2A288 527 aaKnown RBP10.63□□□□□ -0.71
COL9A1-202ENST00000357250 LY86O95711 162 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 OR4E1P0C645 316 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 SSTP61278 116 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 RAC1P63000 192 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 RNF4P78317 190 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 TRA2AQ13595 282 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL9A1-202ENST00000357250 Q6ZRG5 221 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 CNOT1A5YKK6 2376 aaKnown RBP10.63□□□□□ -0.71
COL9A1-202ENST00000357250 ACKR3P25106 362 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 ZNF626Q68DY1 528 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 VHLLQ6RSH7 139 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 BAP18Q8IXM2 172 aa10.63□□□□□ -0.71
COL9A1-202ENST00000357250 C1orf87Q8N0U7 546 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms