RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TIGD4Q8IY51 512 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 OR6V1Q8N148 313 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 CYB561A3Q8NBI2 242 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ATP6V1C2Q8NEY4 427 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 OR10H4Q8NGA5 316 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 DYNC2LI1Q8TCX1 351 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 OTULINQ96BN8 352 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SLC25A36Q96CQ1 311 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 RASD2Q96D21 266 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SMIM19Q96E16 107 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ADGRG7Q96K78 797 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SFXN2Q96NB2 322 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 OR5B2Q96R09 309 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 INTS14Q96SY0 518 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 WACQ9BTA9 647 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 MRPL13Q9BYD1 178 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SYT4Q9H2B2 425 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 MMP27Q9H306 513 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 RPRD1BQ9NQG5 326 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 TAS2R16Q9NYV7 291 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF629Q9UEG4 869 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 CLEC2DQ9UHP7 191 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF346Q9UL40 294 aaKnown RBP6.09□□□□□ -1.43
VPS13A-201ENST00000355766 SSR3Q9UNL2 185 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 GSTK1Q9Y2Q3 226 aa6.09□□□□□ -1.43
VPS13A-201ENST00000355766 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 A0A075B6Q4 140 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 IGKV3D-15A0A087WSY6 115 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TRGV5A0A0B4J1U4 118 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 A0A1W2PQL4 384 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 C17orf51A8MQB3 221 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 EEF1E1-BLOC1S5C9J1V9 151 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 G3V3Y1 287 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 MS4A18H0YCH9 400 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 H3BML4 177 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 GPR171O14626 319 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 EEF1E1O43324 174 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TMCC2O75069 709 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 KHDRBS3O75525 346 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 SC5DO75845 299 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 GATBO75879 557 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF432O94892 652 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TFP02787 698 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 KRT8P05787 483 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ADRA2AP08913 450 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF43P17038 809 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ALOX5APP20292 161 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 GADD45AP24522 165 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 MAPK3P27361 379 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 DCTDP32321 178 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 CRYBB2P43320 205 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 CCR9P51686 369 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 GBX2P52951 348 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 SUCLG1P53597 346 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF85Q03923 595 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 AQP6Q13520 282 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 MS4A18Q3C1V0 323 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 KRTAP24-1Q3LI83 254 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM176BQ3YBM2 270 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ACSF3Q4G176 576 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 C10orf128Q5T292 105 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ZNF684Q5T5D7 378 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 DMKNQ6E0U4 476 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 SLC18B1Q6NT16 456 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 KCTD18Q6PI47 426 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 FOXL2NBQ6ZUU3 175 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 IGFN1Q86VF2 1251 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 BCL6BQ8N143 479 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 FAM83FQ8NEG4 500 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 OR6K6Q8NGW6 343 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 OR2V1Q8NHB1 315 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 OR14L1PQ8NHC6 308 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 OTOSQ8NHW6 89 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 SNX33Q8WV41 574 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 S100ZQ8WXG8 99 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 AP3S1Q92572 193 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM45BQ96B21 275 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 KCTD7Q96MP8 289 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 RBP7Q96R05 134 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 TIMP4Q99727 224 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 NXF2Q9GZY0 626 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 NAA50Q9GZZ1 169 aaKnown RBP6.08□□□□□ -1.44
VPS13A-201ENST00000355766 DCSTAMPQ9H295 470 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 LDAHQ9H6V9 325 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 EXO5Q9H790 373 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 NIPAL2Q9H841 368 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 RNF122Q9H9V4 155 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 B9D1Q9UPM9 204 aa6.08□□□□□ -1.44
VPS13A-201ENST00000355766 ALPK2Q86TB3 2170 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 IQCMA0A1B0GVH7 501 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 METTL15A6NJ78 407 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 TMEM212A6NML5 194 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 OGG1O15527 345 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 GMFGO60234 142 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 ARL6IP5O75915 188 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PGA4P0DJD7 388 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 PGA3P0DJD8 388 aa6.07□□□□□ -1.44
VPS13A-201ENST00000355766 FCGR2AP12318 317 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms