RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SLC25A26Q70HW3 274 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 LYSMD2Q8IV50 215 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 OR13C5Q8NGS8 318 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 GABARAPL3Q9BY60 117 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 MAGEB1P43366 347 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SKA3Q8IX90 412 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SLC35B4Q969S0 331 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 CNRIP1Q96F85 164 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SARGQ9BW04 601 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 DLL4Q9NR61 685 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 MED9Q9NWA0 146 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SLC17A1Q14916 467 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 TMUB2Q71RG4 321 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SLC7A6Q92536 515 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 MN1Q10571 1320 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 ANKUB1A6NFN9 424 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 CD276Q5ZPR3 534 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SYS1Q8N2H4 156 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 KDF1Q8NAX2 398 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 ALKBH3Q96Q83 286 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 GABARAPL1Q9H0R8 117 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 LIN7CQ9NUP9 197 aaKnown RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 PLA2G3Q9NZ20 509 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 ING1Q9UK53 422 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 A3GALT2U3KPV4 340 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 SUMO3P55854 103 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 ERHP84090 104 aaKnown RBP16.32■□□□□ 0.2
COL18A1-202ENST00000355480 DHRS13Q6UX07 377 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 FZD6O60353 706 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 SULT1C4O75897 302 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 SPATA46Q5T0L3 261 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 FBXO17Q96EF6 278 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 RAB19A4D1S5 217 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 AIPO00170 330 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 DGCR2P98153 550 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 C2orf76Q3KRA6 126 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 KCNRGQ8N5I3 272 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 OR1J1Q8NGS3 322 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 LILRB4Q8NHJ6 448 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 NDUFB11Q9NX14 153 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 CSAG2Q9Y5P2 127 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 PAX6P26367 422 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 HOXD12P35452 270 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 CEACAM16Q2WEN9 425 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 KIRREL2Q6UWL6 708 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 BPIFCQ8NFQ6 507 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 AKR7LQ8NHP1 331 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 TRGV5A0A0B4J1U4 118 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 P2RX3P56373 397 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 ZNF121P58317 390 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-202ENST00000355480 CTU2Q2VPK5 515 aaKnown RBP16.31■□□□□ 0.2
COL18A1-202ENST00000355480 OR10K2Q6IF99 312 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 TSEN54Q7Z6J9 526 aaKnown RBP16.31■□□□□ 0.2
COL18A1-202ENST00000355480 CNTRLQ7Z7A1 2325 aa16.31■□□□□ 0.2
COL18A1-202ENST00000355480 H2AFB1P0C5Y9 115 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 MPLP40238 635 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 ADGRG3Q86Y34 549 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 ARPC4-TTLL3A0A0A6YYG9 625 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 MT-ND4LP03901 98 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 AGERQ15109 404 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 NUDCD2Q8WVJ2 157 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SSSCA1O60232 199 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 OR2A2Q6IF42 318 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 OR10G3Q8NGC4 313 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 PTDSS2Q9BVG9 487 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 TRAV17A0A0B4J275 112 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 GPR37O15354 613 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 FCGR2CP31995 323 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SMIM21Q3B7S5 101 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 TMEM268Q5VZI3 342 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 FAM173AQ9BQD7 235 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SLC25A19Q9HC21 320 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 XRCC3O43542 346 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 METAP1P53582 386 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 WIPI1Q5MNZ9 446 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-202ENST00000355480 VASH2Q86V25 355 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 OR10P1Q8NGE3 313 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SMIM19Q96E16 107 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 SPNS1Q9H2V7 528 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 ZNF331Q9NQX6 463 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-202ENST00000355480 GAB2Q9UQC2 676 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 KIAA0100Q14667 2235 aaKnown RBP16.3■□□□□ 0.2
COL18A1-202ENST00000355480 BTAF1O14981 1849 aa16.3■□□□□ 0.2
COL18A1-202ENST00000355480 A0A0A6YYD5 115 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 HSPB2A8KAH6 182 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 TERTO14746 1132 aaKnown RBP16.29■□□□□ 0.2
COL18A1-202ENST00000355480 NME1P15531 152 aaKnown RBP16.29■□□□□ 0.2
COL18A1-202ENST00000355480 CDAP32320 146 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 HSPB2Q16082 182 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 ANKRD53Q8N9V6 530 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 OR8U1Q8NH10 309 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 SLCO1C1Q9NYB5 712 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 ST3GAL6Q9Y274 331 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 NOXO1Q8NFA2 376 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 PCED1AQ9H1Q7 454 aa16.29■□□□□ 0.2
COL18A1-202ENST00000355480 IKZF5Q9H5V7 419 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms