RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NAGAP17050 411 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 PRAMEF20Q5VT98 475 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ZBTB44Q8NCP5 570 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ADAD2Q8NCV1 583 aaKnown RBP17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ASH2LQ9UBL3 628 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 A0A1W2PP11 408 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 TMEM200CA6NKL6 621 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF814B7Z6K7 855 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 RER1O15258 196 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF20P17024 532 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 MPGP29372 298 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 MMP16P51512 607 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 LUMP51884 338 aaPredicted RBP17.38■□□□□ 0.37
COL13A1-201ENST00000354547 ATP1B3P54709 279 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 EMP2P54851 167 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 CLDN6P56747 220 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 IL13RA1P78552 427 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 MPPED2Q15777 294 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 C5orf46Q6UWT4 87 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 HDDC2Q7Z4H3 204 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 MISPQ8IVT2 679 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 NKAIN3Q8N8D7 197 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 PPP1R1CQ8WVI7 109 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 B3GAT1Q9P2W7 334 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 CYB5R1Q9UHQ9 305 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 RPH3AQ9Y2J0 694 aaPredicted RBP17.38■□□□□ 0.37
COL13A1-201ENST00000354547 FREM2Q5SZK8 3169 aa17.38■□□□□ 0.37
COL13A1-201ENST00000354547 C13orf42A0A1B0GVH6 325 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 SCRG1O75711 98 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 STK17BO94768 372 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF93P35789 620 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 AFF3P51826 1226 aaKnown RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ELP2Q6IA86 826 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 RHBDD2Q6NTF9 364 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 TMEM81Q6P7N7 255 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 UEVLDQ8IX04 471 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 NFAM1Q8NET5 270 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR5D14Q8NGL3 314 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR2AJ1Q8NGZ0 328 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 NPRL2Q8WTW4 380 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 AQP3Q92482 292 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 TMEM41AQ96HV5 264 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF471Q9BX82 626 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 SLCO5A1Q9H2Y9 848 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 KCNK7Q9Y2U2 307 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 TUBAL3A6NHL2 446 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 GDF9O60383 454 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 MPIG6BO95866 241 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 IFNA6P05013 189 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 RPA2P15927 270 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 RAB3AP20336 220 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ZP3P21754 424 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ZP4Q12836 540 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 TOMM20Q15388 145 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 CLVS2Q5SYC1 327 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 SLC51BQ86UW2 128 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 SLC22A24Q8N4F4 322 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 TMEM104Q8NE00 496 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR5M8Q8NGP6 311 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 PHF7Q9BWX1 381 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 SDHAF3Q9NRP4 125 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR14I1A6ND48 311 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR2AT4A6NND4 320 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 HOXD4P09016 255 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 LAP3P28838 519 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 LCN10Q6JVE6 187 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR5D18Q8NGL1 313 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 OR5M9Q8NGP3 310 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 ST8SIA2Q92186 375 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 MRGPRFQ96AM1 343 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 VRK1Q99986 396 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-201ENST00000354547 LHFPL6Q9Y693 200 aa17.37■□□□□ 0.37
COL13A1-201ENST00000354547 CD74P04233 296 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 ERCC1P07992 297 aaPredicted RBP17.36■□□□□ 0.37
COL13A1-201ENST00000354547 FOSL2P15408 326 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 PCK2Q16822 640 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 FAM219AQ8IW50 185 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 PPA2Q9H2U2 334 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 LOC390937A0A1W2PQ73 354 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 STARP49675 285 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 RSPO4Q2I0M5 234 aaPredicted RBP17.36■□□□□ 0.37
COL13A1-201ENST00000354547 GUSBP11Q6P575 273 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 GLIPR1L1Q6UWM5 242 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 OR6K3Q8NGY3 331 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 FOXRED1Q96CU9 486 aaPredicted RBP17.36■□□□□ 0.37
COL13A1-201ENST00000354547 PRRT1Q99946 306 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF768Q9H5H4 540 aaKnown RBP17.36■□□□□ 0.37
COL13A1-201ENST00000354547 ALKBH4Q9NXW9 302 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 ZNF319Q9P2F9 582 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 B3GALT5Q9Y2C3 310 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 RHBDD3Q9Y3P4 386 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 PI4KAP42356 2102 aa17.36■□□□□ 0.37
COL13A1-201ENST00000354547 PI3P19957 117 aa17.35■□□□□ 0.37
COL13A1-201ENST00000354547 TMEM176BQ3YBM2 270 aaPredicted RBP17.35■□□□□ 0.37
COL13A1-201ENST00000354547 LYPD6Q86Y78 171 aa17.35■□□□□ 0.37
COL13A1-201ENST00000354547 NAXDQ8IW45 347 aa17.35■□□□□ 0.37
COL13A1-201ENST00000354547 SPERTQ8NA61 448 aa17.35■□□□□ 0.37
COL13A1-201ENST00000354547 POC1BQ8TC44 478 aa17.35■□□□□ 0.37
COL13A1-201ENST00000354547 MARCH1Q8TCQ1 289 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms