RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 BTN1A1Q13410 526 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 CEACAM16Q2WEN9 425 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 RFX4Q33E94 735 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 PLBD1Q6P4A8 553 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 HSD17B13Q7Z5P4 300 aaPredicted RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 C1QL4Q86Z23 238 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 KDM8Q8N371 416 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 YIPF7Q8N8F6 280 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 OR4A15Q8NGL6 344 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 LRRC58Q96CX6 371 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 ZG16BQ96DA0 208 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 MRPL48Q96GC5 212 aaKnown RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 DMRTB1Q96MA1 342 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 HOPXQ9BPY8 73 aaPredicted RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 DUSP26Q9BV47 211 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 MND1Q9BWT6 205 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 LINC00470Q9BZP3 86 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 SLITRK2Q9H156 845 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 PIF1Q9H611 641 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 GPR35Q9HC97 309 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 IL1RAPQ9NPH3 570 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 CMTM6Q9NX76 183 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 BABAM2Q9NXR7 383 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 MARCOQ9UEW3 520 aaPredicted RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 UBQLN2Q9UHD9 624 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 SLC23A1Q9UHI7 598 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 ADAM30Q9UKF2 790 aa9.55□□□□□ -0.88
RTN3-204ENST00000354497 ZNF346Q9UL40 294 aaKnown RBP9.55□□□□□ -0.88
RTN3-204ENST00000354497 VWFP04275 2813 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 MFSD2BA6NFX1 497 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 TMEM233B4DJY2 109 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 VAMP5O95183 116 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 AGR2O95994 175 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 IFNGP01579 166 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 IGHV2-5P01817 119 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 SNRPBP14678 240 aaKnown RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 MYL9P24844 172 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 GTF2E2P29084 291 aaKnown RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 P2RY4P51582 365 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 CCL8P80075 99 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 MRPS11P82912 194 aaKnown RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 PLAURQ03405 335 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 SRSF4Q08170 494 aaKnown RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 GSG1Q2KHT4 349 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 COQ5Q5HYK3 327 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 FRRS1Q6ZNA5 592 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 C17orf107Q6ZR85 190 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 DOK3Q7L591 496 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 WDFY1Q8IWB7 410 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 BCL6BQ8N143 479 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 GLB1L3Q8NCI6 653 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 DUSP18Q8NEJ0 188 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 TWIST2Q8WVJ9 160 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 CANT1Q8WVQ1 401 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 DVL3Q92997 716 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 SLC25A36Q96CQ1 311 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 SDHCQ99643 169 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 GPA33Q99795 319 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 MECRQ9BV79 373 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 DNTTIP1Q9H147 329 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 DCSTAMPQ9H295 470 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 SAV1Q9H4B6 383 aaPredicted RBP9.54□□□□□ -0.88
RTN3-204ENST00000354497 HEXA-AS1Q9H8Q6 139 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 RNF121Q9H920 327 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 TAAR3PQ9P1P4 343 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 ERVK-18Q9QC07 812 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 ZNF69Q9UC07 566 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 STUB1Q9UNE7 303 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 RASD1Q9Y272 281 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 TPRKBQ9Y3C4 175 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 RAP2CQ9Y3L5 183 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 WIPI2Q9Y4P8 454 aa9.54□□□□□ -0.88
RTN3-204ENST00000354497 SLC16A6O15403 523 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 FRS3O43559 492 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 TIPRLO75663 272 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 RBBP9O75884 186 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 RAB36O95755 333 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 FSHBP01225 129 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 RNASE1P07998 156 aaKnown RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 GATA3P23771 443 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 POU1F1P28069 291 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 GCH1P30793 250 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 GLRXP35754 106 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 DNAJB13P59910 316 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 EMX1Q04741 257 aaPredicted RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.53□□□□□ -0.88
RTN3-204ENST00000354497 SCN1BQ07699 218 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 FUT5Q11128 374 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 C1DQ13901 141 aaKnown RBP9.53□□□□□ -0.88
RTN3-204ENST00000354497 PCLAFQ15004 111 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 SLC35F1Q5T1Q4 408 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 CARD17Q5XLA6 110 aa9.53□□□□□ -0.88
RTN3-204ENST00000354497 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms