RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR4K17Q8NGC6 315 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 NKD1Q969G9 470 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 SLC6A7Q99884 636 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 SEC61A2Q9H9S3 476 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 FXYD6-FXYD2A0A087WZ82 144 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 LOC102723996A0A087X1L8 192 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OR14I1A6ND48 311 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 AQP7P3A6NL99 342 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 DISC1C4P0D8 188 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 I3L521 148 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 RP2O75695 350 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OPN1LWP04000 364 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 FGF5P12034 268 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 PPP3CBP16298 524 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF28P17035 718 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 AANATQ16613 207 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 LY6G6FQ5SQ64 297 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OR13C9Q8NGT0 318 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 PRRT1Q99946 306 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 FXYD6Q9H0Q3 95 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OCIAD1Q9NX40 245 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 KCNN3Q9UGI6 736 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 NXT1Q9UKK6 140 aaKnown RBP19.61■□□□□ 0.73
UPF3A-201ENST00000351487 GABREP78334 506 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 PCOLCEQ15113 449 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 FAM209AQ5JX71 171 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 TMED4Q7Z7H5 227 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 NAXDQ8IW45 347 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OR4S1Q8NGB4 309 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 OR51E1Q8TCB6 317 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 ZBTB8AQ96BR9 441 aa19.61■□□□□ 0.73
UPF3A-201ENST00000351487 AKIRIN1Q9H9L7 192 aaPredicted RBP19.61■□□□□ 0.73
UPF3A-201ENST00000351487 PNRC2Q9NPJ4 139 aaKnown RBP19.61■□□□□ 0.73
UPF3A-201ENST00000351487 TMEM14DPA8MWL7 114 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 TP53I11O14683 189 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 RPA2P15927 270 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF43P17038 809 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 CDAP32320 146 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 HLA-BQ31612 363 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 RNASE10Q5GAN6 216 aaKnown RBP19.6■□□□□ 0.73
UPF3A-201ENST00000351487 CLVS2Q5SYC1 327 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 PMS2CLQ68D20 193 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 TRAPPC6BQ86SZ2 158 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 FARSAQ9Y285 508 aaKnown RBP19.6■□□□□ 0.73
UPF3A-201ENST00000351487 CCDC163A0A0D9SF12 145 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 RFPL4AA6NLU0 287 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 RFPL4AL1F8VTS6 287 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 RAMP1O60894 148 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF20P17024 532 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 DHRS2Q13268 280 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 TMEM81Q6P7N7 255 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 CMBLQ96DG6 245 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 WBP1Q96G27 269 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 ASH2LQ9UBL3 628 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 PILRBQ9UKJ0 227 aa19.6■□□□□ 0.73
UPF3A-201ENST00000351487 TEX51A0A1B0GUA7 166 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 CCL1P22362 96 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 CALCRP30988 508 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SFTPDP35247 375 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF93P35789 620 aaPredicted RBP19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SRSF4Q08170 494 aaKnown RBP19.59■□□□□ 0.73
UPF3A-201ENST00000351487 TMEM176BQ3YBM2 270 aaPredicted RBP19.59■□□□□ 0.73
UPF3A-201ENST00000351487 CDNFQ49AH0 187 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SCGB2B2Q4G0G5 96 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SFRP5Q5T4F7 317 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 OR8B12Q8NGG6 310 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 ARL6Q9H0F7 186 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 FSCN3Q9NQT6 498 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 CD8AP01732 235 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 HOXA6P31267 233 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF121P58317 390 aaPredicted RBP19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SLC35A1P78382 337 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 IL11RAQ14626 422 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 CARD17Q5XLA6 110 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 AWAT2Q6E213 333 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 SIGIRRQ6IA17 410 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 LPCAT3Q6P1A2 487 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 OR2W3Q7Z3T1 314 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 DTWD2Q8NBA8 298 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 OR5M8Q8NGP6 311 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 MED9Q9NWA0 146 aa19.59■□□□□ 0.73
UPF3A-201ENST00000351487 QDPRP09417 244 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 ARPC4P59998 168 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 SORDQ00796 357 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 TAF13Q15543 124 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 PGAP1Q75T13 922 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 OR5AS1Q8N127 324 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 ZDHHC22Q8N966 263 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 STEAP2Q8NFT2 490 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 SCARB1Q8WTV0 552 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 IER2Q9BTL4 223 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 VSIG4Q9Y279 399 aa19.58■□□□□ 0.73
UPF3A-201ENST00000351487 A0A087WZY1 265 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 RER1O15258 196 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 PRKXP51817 358 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 PRAMEF20Q5VT98 475 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 GSG1LQ6UXU4 331 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 RFPL4BQ6ZWI9 263 aa19.57■□□□□ 0.72
UPF3A-201ENST00000351487 ABHD12BQ7Z5M8 362 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-201ENST00000351487 ANGPTL5Q86XS5 388 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms