RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 TMEM234Q8WY98 164 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 SLC38A4Q969I6 547 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 ZBTB8AQ96BR9 441 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 AJUBAQ96IF1 538 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 PLEKHA8Q96JA3 519 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 NPAS1Q99742 590 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 GPA33Q99795 319 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 PRSS27Q9BQR3 290 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 FNDC11Q9BVV2 318 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 ZNF703Q9H7S9 590 aaPredicted RBP4.54□□□□□ -1.68
VCAM1-202ENST00000347652 NMNAT1Q9HAN9 279 aaPredicted RBP4.54□□□□□ -1.68
VCAM1-202ENST00000347652 PARPBPQ9NWS1 579 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 VNN3Q9NY84 501 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 MRM2Q9UI43 246 aaKnown RBP4.54□□□□□ -1.68
VCAM1-202ENST00000347652 NAGKQ9UJ70 344 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 SAMHD1Q9Y3Z3 626 aaKnown RBP4.54□□□□□ -1.68
VCAM1-202ENST00000347652 TESMINQ9Y4I5 508 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 CEPT1Q9Y6K0 416 aa4.54□□□□□ -1.68
VCAM1-202ENST00000347652 NBPF19A0A087WUL8 3843 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 NINQ8N4C6 2090 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 USP9XQ93008 2570 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CRYBG3Q68DQ2 2970 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZNF99A8MXY4 864 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 VCYO14598 125 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 NBR2O15453 112 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CHP2O43745 196 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 H1F0P07305 194 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ERCC1P07992 297 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 COX5BP10606 129 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 VPREB1P12018 145 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 APOBEC1P41238 236 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 SMIM11AP58511 58 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 DGCR6Q14129 220 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 GK3PQ14409 553 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 KLHL22Q53GT1 634 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ALG10BQ5I7T1 473 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZNF691Q5VV52 312 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 GRINAQ7Z429 371 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 TMEM179BQ7Z7N9 219 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 AMIGO2Q86SJ2 522 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 TMEM251Q8N6I4 163 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 FAM98AQ8NCA5 519 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 OR1L6Q8NGR2 347 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 NUDCD2Q8WVJ2 157 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 PNPLA2Q96AD5 504 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CENPNQ96H22 339 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 EPYCQ99645 322 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 BDH2Q9BUT1 245 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ST6GALNAC5Q9BVH7 336 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 OR2B2Q9GZK3 357 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ANKRD19PQ9H560 264 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ASF1BQ9NVP2 202 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 MRPL39Q9NYK5 338 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 RPS6KB2Q9UBS0 482 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 B4GALT7Q9UBV7 327 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 NKX1-2Q9UD57 310 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 SLC7A7Q9UM01 511 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 VDAC3Q9Y277 283 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 BAHCC1Q9P281 2608 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 NCKAP5O14513 1909 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 A0A087WUJ7 227 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ELOA3CA0A087WX78 387 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ELOA3DA6NLF2 546 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZAR1LA6NP61 321 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 SHISA8B8ZZ34 492 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 M0QXV9 152 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 TNFRSF11BO00300 401 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 GADD45GO95257 159 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CTRB1P17538 263 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 GDF1P27539 372 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 TACR3P29371 465 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 IFNA8P32881 189 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 LIPAP38571 399 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 EIF1P41567 113 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 MAGEA5P43359 124 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 POLR2HP52434 150 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 PLGLB1Q02325 96 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CRYZQ08257 329 aaKnown RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 FOXF1Q12946 379 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 TRAM2Q15035 370 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 EXOC3L2Q2M3D2 409 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ELOA3BQ3SY89 546 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 CTRB2Q6GPI1 263 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ACSM6Q6P461 480 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 SLC22A16Q86VW1 577 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ELOA3Q8NG57 546 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ACOT11Q8WXI4 607 aaPredicted RBP4.53□□□□□ -1.68
VCAM1-202ENST00000347652 FBXO17Q96EF6 278 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZNF426Q9BUY5 554 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 SEMA6AQ9H2E6 1030 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 ZDHHC11Q9H8X9 412 aa4.53□□□□□ -1.68
VCAM1-202ENST00000347652 REEP1Q9H902 201 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms