RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MAPK3P27361 379 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SFTPDP35247 375 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PRKXP51817 358 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ATP1B3P54709 279 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 TLE3Q04726 772 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 GLO1Q04760 184 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PPP1R1AQ13522 171 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 C3P1Q6ZMU1 363 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 H1FNTQ75WM6 255 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 OR5AS1Q8N127 324 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 OR13C9Q8NGT0 318 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 RNF138Q8WVD3 245 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 RNF133Q8WVZ7 376 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 CCNL2Q96S94 520 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 PBOV1Q9GZY1 135 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 SLITRK2Q9H156 845 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF768Q9H5H4 540 aaKnown RBP5.35□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF224Q9NZL3 707 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 COPS7AQ9UBW8 275 aa5.35□□□□□ -1.55
CLCN3-201ENST00000347613 IGKV1D-8A0A087WSZ0 117 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ANKUB1A6NFN9 424 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 SNRPGP15A8MWD9 76 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PATE3B3GLJ2 98 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 C3orf80F5H4A9 247 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 TRIM77I1YAP6 450 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 L7N2F9 121 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 BCAT2O15382 392 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 LDOC1O95751 146 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PMP2P02689 132 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 AKAIN1P0CW23 69 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PGA4P0DJD7 388 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PGA3P0DJD8 388 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 CD96P40200 585 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ARL4DP49703 201 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 NKAIN1Q4KMZ8 207 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 RHBDD2Q6NTF9 364 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PAPD4Q6PIY7 484 aaKnown RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PNLDC1Q8NA58 520 aaKnown RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 CADM4Q8NFZ8 388 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 OR5D18Q8NGL1 313 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 EDEM2Q9BV94 578 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ARL6Q9H0F7 186 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PRO3102Q9H379 93 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 EXO5Q9H790 373 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 BARX1Q9HBU1 254 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 SDHAF2Q9NX18 166 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 IGLV3-12A0A075B6K2 115 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 RNF222A6NCQ9 220 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 TRAF3IP2O43734 574 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PRAF2O60831 178 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 AHSA1O95433 338 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 RAB3DO95716 219 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ISG15P05161 165 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 CD63P08962 238 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 DBHP09172 617 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 HRH1P35367 487 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 EPHA4P54764 986 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 SRSF3P84103 164 aaKnown RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ATXN7L3Q14CW9 347 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ANGPT1Q15389 498 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 CDNFQ49AH0 187 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 C1orf100Q5SVJ3 147 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF529Q6P280 563 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PLXDC1Q8IUK5 500 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 OR8B12Q8NGG6 310 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 DNASE2BQ8WZ79 361 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 RBPMSQ93062 196 aaKnown RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 MVB12AQ96EY5 273 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 PELOQ9BRX2 385 aaKnown RBP5.34□□□□□ -1.55
CLCN3-201ENST00000347613 RDH8Q9NYR8 311 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM14AQ9Y6G1 99 aa5.34□□□□□ -1.55
CLCN3-201ENST00000347613 A0A0G2JMM0 328 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 A0A1W2PPB8 328 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 A0A1W2PRS3 328 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 KIR3DP1A8MWS1 328 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 SIGLEC6O43699 453 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 DUX1O43812 170 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 CD74P04233 296 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 FSTP19883 344 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 S100A11P31949 105 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 DCAF7P61962 342 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 SKP1P63208 163 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 HGFACQ04756 655 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 BAMBIQ13145 260 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 GFOD2Q3B7J2 385 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 BPIFB2Q8N4F0 458 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 EID2Q8N6I1 236 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 OR10K1Q8NGX5 313 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 NPRL2Q8WTW4 380 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 RRNAD1Q96FB5 475 aaKnown RBP5.34□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.56
CLCN3-201ENST00000347613 DHRS9Q9BPW9 319 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 SELENOIQ9C0D9 397 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 UBE2ZQ9H832 354 aaPredicted RBP5.34□□□□□ -1.56
CLCN3-201ENST00000347613 SEC61A2Q9H9S3 476 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 CHST11Q9NPF2 352 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM138Q9NPI0 162 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 MYOTQ9UBF9 498 aa5.34□□□□□ -1.56
CLCN3-201ENST00000347613 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms