RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IL19Q9UHD0 177 aa13.41□□□□□ -0.26
TSPAN4-201ENST00000346501 NF1P21359 2839 aa13.41□□□□□ -0.26
TSPAN4-201ENST00000346501 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 ISPDA4D126 451 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 IFNL4K9M1U5 179 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 CLUP10909 449 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 RPS27P42677 84 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 SRP9P49458 86 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 CRISP1P54107 249 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 MVKQ03426 396 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 DBPQ10586 325 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 HLXQ14774 488 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 TRIP10Q15642 601 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 SLC35D3Q5M8T2 416 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 ACSM5Q6NUN0 579 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 COLCA1Q6ZS62 124 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 PARP8Q8N3A8 854 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 UTP4Q969X6 686 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 KCNJ15Q99712 375 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 SLC22A4Q9H015 551 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 POFUT1Q9H488 388 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 MED20Q9H944 212 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 SLC25A19Q9HC21 320 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 H2AFY2Q9P0M6 372 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
TSPAN4-201ENST00000346501 NSD1Q96L73 2696 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 IQCF6A8MYZ5 107 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 PRKXP51817 358 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 PCK2Q16822 640 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 LCN1P1Q5VSP4 162 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 FAHD1Q6P587 224 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 RHOUQ7L0Q8 258 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 GLCCI1Q86VQ1 547 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 CPOQ8IVL8 374 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 ZNF454Q8N9F8 522 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 BHLHE23Q8NDY6 225 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 DUS3LQ96G46 650 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 GAL3ST1Q99999 423 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 PCDHB10Q9UN67 800 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 PPP1R3CQ9UQK1 317 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 N6AMT1Q9Y5N5 214 aa13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 FN1P02751 2386 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-201ENST00000346501 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 GGT3PA6NGU5 568 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 XRCC2O43543 280 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 H2BFMP0C1H6 154 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 GK2Q14410 553 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 KRTAP27-1Q3LI81 207 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 AMIGO2Q86SJ2 522 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 OR51F2Q8NH61 342 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 THEM6Q8WUY1 208 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 ZNRF4Q8WWF5 429 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 ZMYND19Q96E35 227 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 CENPNQ96H22 339 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 TREM2Q9NZC2 230 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 WIPI2Q9Y4P8 454 aa13.38□□□□□ -0.27
TSPAN4-201ENST00000346501 LRRC30A6NM36 301 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 TBX1O43435 398 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ANXA2P07355 339 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 LYNP07948 512 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 IRF2P14316 349 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 CFL1P23528 166 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 OTX1P32242 354 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 DAPP51397 102 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 MZT1Q08AG7 82 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 PTGES3Q15185 160 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 RSPO1Q2MKA7 263 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 LINC01590Q5TEZ4 76 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEM236Q5W0B7 351 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ZFP1Q6P2D0 407 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ASRGL1Q7L266 308 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 C1orf87Q8N0U7 546 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 OR10S1Q8NGN2 331 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ST7LQ8TDW4 575 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ITLN1Q8WWA0 313 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ABHD6Q9BV23 337 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 MARCH7Q9H992 704 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 TMEM106BQ9NUM4 274 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 SONP18583 2426 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-201ENST00000346501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 FAM157CP0CG43 387 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 SRD5A1P18405 259 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 IGFBP5P24593 272 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 DDOSTP39656 456 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 CX3CR1P49238 355 aa13.36□□□□□ -0.27
TSPAN4-201ENST00000346501 DVL1P1P54792 670 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms