RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RTN4IP1Q8WWV3 396 aaPredicted RBP15.84■□□□□ 0.13
SPAST-202ENST00000345662 PRRX2Q99811 253 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 LRIT1Q9P2V4 623 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 DNMT3BQ9UBC3 853 aaKnown RBP15.84■□□□□ 0.13
SPAST-202ENST00000345662 ANKRD20A5PA0PJZ0 165 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 ANGPTL7O43827 346 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 ABLIM3O94929 683 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 HSF1Q00613 529 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 PLGLAQ15195 96 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 PRTGQ2VWP7 1150 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 OR10J5Q8NHC4 309 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 KCNJ15Q99712 375 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 BARHL1Q9BZE3 327 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 GNG12Q9UBI6 72 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 DDX60LQ5H9U9 1706 aaKnown RBP15.84■□□□□ 0.13
SPAST-202ENST00000345662 GDF1P27539 372 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 RAE1P78406 368 aaKnown RBP15.84■□□□□ 0.13
SPAST-202ENST00000345662 FGF13Q92913 245 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 S1PR5Q9H228 398 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 RNF186Q9NXI6 227 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 LOXHD1Q8IVV2 1947 aa15.84■□□□□ 0.13
SPAST-202ENST00000345662 H0Y8G0 127 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 MPC2O95563 127 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 NPBWR1P48145 328 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 DPTQ07507 201 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 ARHGEF39Q8N4T4 335 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 FAM103A1Q9BTL3 118 aaKnown RBP15.83■□□□□ 0.13
SPAST-202ENST00000345662 MBTPS2O43462 519 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 AKR7A3O95154 331 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 EIF1P41567 113 aaKnown RBP15.83■□□□□ 0.13
SPAST-202ENST00000345662 MRM1Q6IN84 353 aaKnown RBP15.83■□□□□ 0.13
SPAST-202ENST00000345662 FBXL6Q8N531 539 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 KLHDC1Q8N7A1 406 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 EMC6Q9BV81 110 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 ACTR3CQ9C0K3 210 aaPredicted RBP15.83■□□□□ 0.13
SPAST-202ENST00000345662 UQCC1Q9NVA1 299 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 OR5V1Q9UGF6 321 aa15.83■□□□□ 0.13
SPAST-202ENST00000345662 ELF5Q9UKW6 265 aaPredicted RBP15.83■□□□□ 0.13
SPAST-202ENST00000345662 ZNF816-ZNF321PA0A0X1KG74 233 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 OR8U8P0C7N1 319 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 NTF3P20783 257 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 OPRM1P35372 400 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 SCAND1P57086 179 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 PNLIPRP3Q17RR3 467 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 FAM26DQ5JW98 314 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 ZNF321PQ8N8H1 164 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 GPR84Q9NQS5 396 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 GPR173Q9NS66 373 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 ING1Q9UK53 422 aaPredicted RBP15.83■□□□□ 0.12
SPAST-202ENST00000345662 CACNA1CQ13936 2221 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 GJA4P35212 333 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 CLEC12BQ2HXU8 276 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 C9orf135Q5VTT2 229 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 TMPRSS11FQ6ZWK6 438 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 CATSPERDQ86XM0 798 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 MRPL43Q8N983 215 aaKnown RBP15.83■□□□□ 0.12
SPAST-202ENST00000345662 NUDT9Q9BW91 350 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 SLC35B3Q9H1N7 401 aa15.83■□□□□ 0.12
SPAST-202ENST00000345662 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 GSTZ1O43708 216 aaPredicted RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 FOLR3P41439 243 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SPANXN5Q5MJ07 72 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 IL22RA1Q8N6P7 574 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 PRO1933Q9H354 126 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 RAB18Q9NP72 206 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SIGLEC7Q9Y286 467 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 PTRH2Q9Y3E5 179 aaKnown RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 CCDC187A0A096LP49 1063 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SPP1P10451 314 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 PPP1R1AQ13522 171 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 GGNBP1Q5YKI7 109 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 ZNF230Q9UIE0 474 aaPredicted RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 CTDSPLO15194 276 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 PNPP00491 289 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 DTYMKP23919 212 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 APOBEC1P41238 236 aaKnown RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 LTC4SQ16873 150 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 ADIPOR2Q86V24 386 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 CBLN2Q8IUK8 224 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 REEP6Q96HR9 211 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 GPR137Q96N19 417 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 CHST11Q9NPF2 352 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 KCNE1BA0A087WTH5 132 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 ZNF320A2RRD8 509 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 ABHD16AO95870 558 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 OLFM2O95897 454 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 QDPRP09417 244 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 NOVA1P51513 510 aaKnown RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 IRF3Q14653 427 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 CMBLQ96DG6 245 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 MAP3K3Q99759 626 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 NRSN2Q9GZP1 204 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SLC35D1Q9NTN3 355 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 SLCO1B1Q9Y6L6 691 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 B4GALNT1Q00973 533 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 EEF1A2Q05639 463 aaKnown RBP15.82■□□□□ 0.12
SPAST-202ENST00000345662 OR4N2Q8NGD1 307 aa15.82■□□□□ 0.12
SPAST-202ENST00000345662 TOE1Q96GM8 510 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms