RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PYCR3Q53H96 274 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 ETFBKMTQ8IXQ9 262 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 C7orf66A4D0T2 115 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 SMAD4Q13485 552 aaKnown RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 STRCQ7RTU9 1775 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 C1orf105O95561 183 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 OR2T10Q8NGZ9 312 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 STARD4Q96DR4 205 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 SURF2Q15527 256 aaPredicted RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 GLIPR1L1Q6UWM5 242 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 GLRX5Q86SX6 157 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 WFIKKN1Q96NZ8 548 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 NMES1Q9C002 83 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 NAGKQ9UJ70 344 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 ASPDHA6ND91 283 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 NXPH3O95157 252 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ELOBQ15370 118 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 TXNDC8Q6A555 127 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 IL1F10Q8WWZ1 152 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ALX4Q9H161 411 aaPredicted RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ABLIM3O94929 683 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 SLC2A10O95528 541 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 CPMP14384 443 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 PLCXD3Q63HM9 321 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 H7C1C5 153 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ABHD16AO95870 558 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 TMPPEQ6ZT21 453 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 TEAD3Q99594 435 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ADAT1Q9BUB4 502 aaKnown RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 RAB18Q9NP72 206 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 CMC2Q9NRP2 79 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 PRSS21Q9Y6M0 314 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 GPANK1O95872 356 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ACTR1AP61163 376 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 ZNF92Q03936 586 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 WDR73Q6P4I2 378 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 SH3RF2Q8TEC5 729 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 XRCC2O43543 280 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 PLP2Q04941 152 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 FTSJ1Q9UET6 329 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 DUXBA0A1W2PPF3 345 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 DHRS7BQ6IAN0 325 aaPredicted RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 M1APQ8TC57 530 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 NANOS1Q8WY41 292 aaKnown RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 GSX1Q9H4S2 264 aaPredicted RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 CPEB2Q7Z5Q1 589 aaKnown RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 SYT9Q86SS6 491 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 CTDSP1Q9GZU7 261 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
TRIO-202ENST00000344204 TMEM241Q24JQ0 296 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 FOXJ3Q9UPW0 622 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 CLEC12BQ2HXU8 276 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 PSMF1Q92530 271 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 FAM173AQ9BQD7 235 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
TRIO-202ENST00000344204 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 F12P00748 615 aaPredicted RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 GP1BAP07359 652 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 EIF1P41567 113 aaKnown RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 NUBPLQ8TB37 319 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 SOX7Q9BT81 388 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 FGF18O76093 207 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 AMTP48728 403 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 ZFP64Q9NPA5 681 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 EML5Q05BV3 1969 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 Q9N2K0 584 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 NXT1Q9UKK6 140 aaKnown RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 STAG3L2P0CL84 134 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 TIGITQ495A1 244 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 TP53RKQ96S44 253 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 MIXL1Q9H2W2 232 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 OR14J1Q9UGF5 321 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
TRIO-202ENST00000344204 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 SYNGR4O95473 234 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 SEMA6CQ9H3T2 930 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
TRIO-202ENST00000344204 CXCL2P19875 107 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms